Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00837 ATGGCGTTGGTTCCCTCTCACTGTTCAGTTCAATCGAACAAAGCCTCTATCTCTGCTgcattttcctctttctcaGGTCAGAAACTCCGGCAATGCGCTCGTTTATCTGGCATTACCGTTTCCTCTTCGGCACTTCGGCTGAGAATATCTTGCCTAGCTTCTTCCGCTATTTCGGCCGATTCATCCGTCAAAGCAAAAGCTAACCTGAAAGATTTTCTTCACATAAGTGATTTTGACAAGGCCACTATTATGAAGATTTTAGATCGAGCCACTGAGGTCAAGGCATTACTAAAATCAGGGGATAGGACATTTCAACCATTTAAAGGGAAGACAATGGTGATGATCTTTGCAAAGCCGTCCATGAGAACACGGGTTTCATTTGAGAGTGGTTTTACATTGTTGGGTGGGCATGCTATATATTTAGGACCTGATGATATACAGATGGGTAAGCGGGAGGAGACTCGTGATGTTGCTCGTGTTTTGTCTCGGTATAATGACATTATCATGGCACGCGTTTTTGCTCATCAGGACATACTTGATCTTGCTAAGTATGCAAATGTGGCAGTCATTAATGGCTTGACAGACTACAACCACCCGTGCCAGATAATGGCTGATGCCCTCACTATAATTGAGCACATTGGTCGGCTGGAAGGGACCAAGGTTGTCTATGTTGGAGATGGAAATAATATTGTTCACTCGTGGTTGTTGTTGGCATCTGTAATTCCTTTTCACTTTGTTTGCGTGTGTCCAAAAGGTTTTGAACCTGATGAGAACACAGTTGAAAAGGCACGAAAGGCAGGAATCAGCAAGATTGAGATAACAAATGATCCCAAAGATGCTGTTAGAGGAGCTGATGTTGTATATACTGATGTCTGGGCTAGCATGGGGCAAAAGGAAGAGGCTGCCTACCGTCGCCAAGTGTTTAAAGGATTTCAGGTGGATAAAAGTCTTATGAATCTAGCAGGCCCACAAGCATTTTTCATGCATTGCTTGCCCGCAGAAAGAGGGGTGGAGGTGACTGATGAGGTTATTGAAGCTCCAAATTCAATCGTATTCCCGCAAGCTGAGAACCGATTGCATGCACAGAATGCAATAATGCTGTATCTGCTTGGCAAGTA 1118 0.4347 MALVPSHCSVQSNKASISAAFSSFSGQKLRQCARLSGITVSSSALRLRISCLASSAISADSSVKAKANLKDFLHISDFDKATIMKILDRATEVKALLKSGDRTFQPFKGKTMVMIFAKPSMRTRVSFESGFTLLGGHAIYLGPDDIQMGKREETRDVARVLSRYNDIIMARVFAHQDILDLAKYANVAVINGLTDYNHPCQIMADALTIIEHIGRLEGTKVVYVGDGNNIVHSWLLLASVIPFHFVCVCPKGFEPDENTVEKARKAGISKIEITNDPKDAVRGADVVYTDVWASMGQKEEAAYRRQVFKGFQVDKSLMNLAGPQAFFMHCLPAERGVEVTDEVIEAPNSIVFPQAENRLHAQNAIMLYLLGK 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00837 372 Hamap Ornithine carbamoyltransferase, catabolic [argI]. 69 371 IPR024904 GO:0004585|GO:0006591
Bva10g00837 372 Gene3D Aspartate/ornithine carbamoyltransferase 72 366 IPR036901 GO:0006520|GO:0016597|GO:0016743
Bva10g00837 372 PRINTS Ornithine carbamoyltransferase signature 349 360 IPR002292 GO:0016743
Bva10g00837 372 PRINTS Ornithine carbamoyltransferase signature 187 201 IPR002292 GO:0016743
Bva10g00837 372 PRINTS Ornithine carbamoyltransferase signature 147 160 IPR002292 GO:0016743
Bva10g00837 372 PRINTS Ornithine carbamoyltransferase signature 114 128 IPR002292 GO:0016743
Bva10g00837 372 PRINTS Ornithine carbamoyltransferase signature 287 297 IPR002292 GO:0016743
Bva10g00837 372 SUPERFAMILY Aspartate/ornithine carbamoyltransferase 68 371 IPR036901 GO:0006520|GO:0016597|GO:0016743
Bva10g00837 372 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, CHLOROPLASTIC-LIKE 16 371 - -
Bva10g00837 372 Gene3D Aspartate/ornithine carbamoyltransferase 201 357 IPR036901 GO:0006520|GO:0016597|GO:0016743
Bva10g00837 372 Pfam Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 70 211 IPR006132 GO:0006520|GO:0016743
Bva10g00837 372 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 198 209 IPR006130 GO:0006520|GO:0016597|GO:0016743
Bva10g00837 372 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 116 135 IPR006130 GO:0006520|GO:0016597|GO:0016743
Bva10g00837 372 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 323 332 IPR006130 GO:0006520|GO:0016597|GO:0016743
Bva10g00837 372 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 335 358 IPR006130 GO:0006520|GO:0016597|GO:0016743
Bva10g00837 372 TIGRFAM orni_carb_tr: ornithine carbamoyltransferase 70 370 IPR002292 GO:0016743
Bva10g00837 372 Pfam Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 217 368 IPR006131 GO:0006520|GO:0016597|GO:0016743
Bva10g00837 372 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL 16 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00837 Bva-Chr10 6485843 6490356 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00837 K00611 - vvi:100243725 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00837 10 6485843 6490356 Bva10g00837 10 6485843 6490356 ECH