Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00832 ATGGGAACACTCGGGAAAGCCATATACACCGTCGGGTTCTGGATTCGAGAGACTGGGCAGGTCATTGATCGTATCGGTTCCCGCCTCCAGGGCAGCTACTACTTCCAAGAGCAGCTGTCTAGGCATCGAACTCTTATGAGCATATTGGATAAGACTCCTATTGTTGATAAGGATGCATTTATTGCTCCAAGTGCCTCTGTCATAGGCGACGTTCAAGTTGGAAGGGGATCATCTATTTGGTATGGATGCGTCTTGAGAGGTGATGTGAACAGTATCAGCGTTGGATCTGGAACTAACATACAGGATAACTCCCTTGTGCATGTTGCGAAGTCAAATTTGAGTGGGAAGTTGTTGCCAACTATTATTGGGAACAATGTCACTATTGGTCATAGTGCTGTTATACATGGCTGTACTGTTGAAGATGAAGCATTTGTTGGTATGGGTGCAACACTGCTTGATGGTGTTGTTGTTGAGAAACATGGCATGGTAGCTGCTGGGGCCCTCGTGAGACAGGATACGAGAATTCCCTCTGGGGAGGTATGGGCAGGGAATCCAGCAAAGTTCCTGAGGAAGCTCACTGATGAAGAAATAGCATTTATCTCCCAGTCAGCCACCAATTATAATAACCTTGCACAGGTCCATGCGGCTGAAAATGCCAAGCCCTTCgatgaaattgaatttgagaAGGCACTGCGGAAGAAGTTTGCACATAGAGACGAGGAGTATGATGCAATGATTGGTGTCGTTCGTGAAATTCCTCCAGAGCTTATCCTTCCGGACAATGTTCTTCCCGATAAAGCACAAAAAGCTTCTCAAAAATA 821 0.4531 MGTLGKAIYTVGFWIRETGQVIDRIGSRLQGSYYFQEQLSRHRTLMSILDKTPIVDKDAFIAPSASVIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKLLPTIIGNNVTIGHSAVIHGCTVEDEAFVGMGATLLDGVVVEKHGMVAAGALVRQDTRIPSGEVWAGNPAKFLRKLTDEEIAFISQSATNYNNLAQVHAAENAKPFDEIEFEKALRKKFAHRDEEYDAMIGVVREIPPELILPDNVLPDKAQKASQK 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00832 273 PANTHER DYNACTIN SUBUNIT P25 1 271 - -
Bva10g00832 273 SUPERFAMILY Trimeric LpxA-like enzymes 46 213 IPR011004 -
Bva10g00832 273 CDD LbH_gamma_CA_like 55 212 - -
Bva10g00832 273 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
Bva10g00832 273 Gene3D Hexapeptide repeat proteins 43 222 - -
Bva10g00832 273 PANTHER GAMMA CARBONIC ANHYDRASE 1, MITOCHONDRIAL 1 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00832 Bva-Chr10 6466491 6469494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00832 121 196 Miscellaneous Gene Families AT2G17640 35.294 9.42e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00832 K01726 - jre:108982315 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00832 10 6466491 6469494 Bva10g00832 10 6466491 6469494 ECH