Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00801 ATGCTATCTATTCACTTTTCGAGACTCAGAACTGCAGTCCAAACATCAGTTGTTGAGAGAGAAGTTGGAATACATGACTCCATTAAAGTTCTAATTGGACAAGGGAAGTTGTGGTTTGGCACTCCAagattatttcattctttaaacTACTTGTCTTGTACCAACCTGCATGTATTCCGACGTCCTGGTTTTGCCTTAGCTGCGAACTCAGAATTTGTTAACCAAAGAAGAGTCTTGTCTGTAGTTGGCACACTATCACGAACATTTTCCGTTCCATCTATATCAGGTCCTTCGTTACAAAACTGTGGGTATCATATTGATTGTGCGCTTACTGAATCTGCTCAATTTTCAATCTTCAGTAATTCTCAGAATAAAACAATGGCTGCTCACTTGTATAGcagtaatttttgtttaagcaGCAGAGGTTTGGAGAACTGCAGAAAAGTGAGCATGAGATTGAAAAACCAACAGCTACCAGGAAATCCTGTAATTTATGGTTATTATGCATATCATGTTTCAAAGAGTTGTGACAGTTTTTACCCATACTCAGAGTCAGGGTCAAAAGGTTTTCATAGCGCATCATCTACCTGTTTCTCTACTGGGCCCGCTCCCGATGTGCCATTTGACACTTCCACTCGTGAGGATCAGCTAACAAGTTCTGCAGATTCATCTGAACAGAAAACTACTTCCGgaaaaactttgaagttaATTTCAGGGTCATGCTGCTTGCCCCATcctgagaaagaagaaactggTGGAGAAGACGCACACTTTATTTGTACTGAGGAACAAGTCATAGGGGTGGCAGATGGTGTTGGTGGCTGGGCGGAAGTTGGTGTGGATGCTGGAATTTACTCTCGTCAACTGATGTCCAATTCAGTGAATGCCATCAAAGAGGAGCCGAAAGGTTCTATTAACCCAGCTAGGGTGCTGGAAAAAGCACACTCAATTACAAAAGCCAAGGGTTCCTCAACGGCATGCATCATTGCACTTACTGACCAGGGCCTTCATGCTATTAACTTGGGGGACAGTGGATTTATGGTGGTCCGTAATGGGTGCACTATTTTCCGTTCTCCTGTGCAGCAACATGATTTCAATTTCACATTTCAACTGGAAAGTGGAAGTGATGGTGATTTACCTAGTTCTGGTCAGgttttcACAATTCCTGTTGCACCCGGTGATGTTATAATTGCTGGTACTGATGGACTGTTTGACAACTTGTATAATAATGAGATTACGGCGGTGGTGGTTCATGCAATAAGAGCCGGTTTAAGCCCTCAGGTGACAGCTCAGAAGATAGCTGCATTGGCACGCCAACGTGCACAGGATAAAGACCGCCAAACACCTTTCTCAACTGCTGCTCAAGATGCTGGTTTCCGTTACTATGGTGGCAAACTTGATGATACCACAGTCGTAGTTTCATACATTTCCGGCTCTGAAAATGCGTA 1448 0.4137 MLSIHFSRLRTAVQTSVVEREVGIHDSIKVLIGQGKLWFGTPRLFHSLNYLSCTNLHVFRRPGFALAANSEFVNQRRVLSVVGTLSRTFSVPSISGPSLQNCGYHIDCALTESAQFSIFSNSQNKTMAAHLYSSNFCLSSRGLENCRKVSMRLKNQQLPGNPVIYGYYAYHVSKSCDSFYPYSESGSKGFHSASSTCFSTGPAPDVPFDTSTREDQLTSSADSSEQKTTSGKTLKLISGSCCLPHPEKEETGGEDAHFICTEEQVIGVADGVGGWAEVGVDAGIYSRQLMSNSVNAIKEEPKGSINPARVLEKAHSITKAKGSSTACIIALTDQGLHAINLGDSGFMVVRNGCTIFRSPVQQHDFNFTFQLESGSDGDLPSSGQVFTIPVAPGDVIIAGTDGLFDNLYNNEITAVVVHAIRAGLSPQVTAQKIAALARQRAQDKDRQTPFSTAAQDAGFRYYGGKLDDTTVVVSYISGSENA 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00801 482 ProSiteProfiles PPM-type phosphatase domain profile. 240 476 IPR001932 -
Bva10g00801 482 Gene3D - 245 373 IPR036457 -
Bva10g00801 482 PANTHER PROTEIN PHOSPHATASE 2C 133 481 IPR039123 -
Bva10g00801 482 SUPERFAMILY PP2C-like 242 474 IPR036457 -
Bva10g00801 482 SMART PP2C_4 227 474 IPR001932 -
Bva10g00801 482 Gene3D - 379 481 IPR036457 -
Bva10g00801 482 SMART PP2C_SIG_2 238 476 IPR001932 -
Bva10g00801 482 MobiDBLite consensus disorder prediction 204 231 - -
Bva10g00801 482 MobiDBLite consensus disorder prediction 211 231 - -
Bva10g00801 482 PANTHER PROTEIN PHOSPHATASE 133 481 - -
Bva10g00801 482 Pfam Stage II sporulation protein E (SpoIIE) 265 474 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00801 Bva-Chr10 6344555 6348324 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00801 K17508 - gmx:100805475 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00801 10 6344555 6348324 Bva10g00801 10 6344555 6348324 ECH