Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00793 ATGCTTGAAGCAGTGGAAAGTTCCGTAAATGGTGGCTTCTCCCACTTGCATAGCTATGGAGATAGTAGCGAAGAGGAGCTATCTGTACTTCCTCGTCACACCAAGGTTGTGGTCACTGGAAATAATCGTACCAAATCCGTCCTTGTTGGTCTCCAAGGAGTGGTCAAGAAGGCCGTTGGATTAGGAGGGTGGCATTGGCTGGTTCTTACAAATGGTATTGAAGTGAAGCTACAGAGGAATGCTCTTAGTGTAATTGAAGCACCCACTGGAAATGAGGAAGACGATGaccttgaatttgaaaatgtgCAGTGGAATGGATCAGATATGGcatccGATGACACCCAAAAGTCCCACAAATCGAGGCACAGAATGCATCGATCATCGGGATCATCGCACAAAACTATGAGCAGGTCCCTCTCTGGTGATTCACAGTCTAAGGGGTCCATCTCTATGCCTTACGGGTCCACGAGGGTTGACTTGAGCAAACTTGAGATGGCTGCATTGTTGAGATATTGGCGACACTTCAATCTAGTGGACGCCGTTCCAAACCCATCAAAAGAGCAACTCGTAGATGTTGTTCAGAGGCATTTCATGTCCCAGCAAATGGACGAGTTGCAGGTCATTATGGGCTTTGTTCAAGCTGCAAAGAGACTCAAAACTGTCTGCAAATG 671 0.4545 MLEAVESSVNGGFSHLHSYGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENVQWNGSDMASDDTQKSHKSRHRMHRSSGSSHKTMSRSLSGDSQSKGSISMPYGSTRVDLSKLEMAALLRYWRHFNLVDAVPNPSKEQLVDVVQRHFMSQQMDELQVIMGFVQAAKRLKTVCK 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00793 223 PANTHER SAP30 1 223 IPR024145 -
Bva10g00793 223 MobiDBLite consensus disorder prediction 105 151 - -
Bva10g00793 223 MobiDBLite consensus disorder prediction 131 151 - -
Bva10g00793 223 PANTHER HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30 SIN3-BINDING PROTEIN 1 223 - -
Bva10g00793 223 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 163 216 IPR025718 GO:0005515
Bva10g00793 223 Gene3D - 138 223 IPR038291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00793 Bva-Chr10 6310376 6313742 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00793 - - gmx:100809195 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00793 10 6310376 6313742 Bva10g00793 10 6310376 6313742 ECH