Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00747 ATGGCACTAGTTTCTCTCTCACCTTTCTCGTCTGCACCTTCTTGTCTTAAACTTCGCCGGAAAATCTTTCTTTGCACTTCCAGCATCAATGCCGCTTCCGCGACAGATTCGGTTTCCACTTTCACTTCGGCTTCGACTTCGAATTCAATGCCGAAAGTCGTCGTGACCAGAGAGCGTGGCAAGAATGGCAAGCTCATCAATGCTCTGGGCAAACATGAAATCGATTGTTTGGAGCTTCCACTCATTGAGCACAAGCAGGGACCTGATTTCGACAGGCTTCCTTCCGTATTAAGtgAGAATTCGTTTGACTGGATTGTCTTAACTTCCCCCGAAGCAGGTTCAGTTTTCCTAGAGGCATGGAAAGATGCTGGGGCTCCTCATGTTAAAATTGGTGTTGTTGGAGCTGGTACTGCAAGCATTCTCAAGGAAGCTTTACAGTCGTCAAAGCAATTGCTTGATGTTGCATTTTCACCTTCAAAAGCAACTGGTAAAGTTTTGGCTACAGAGCTACCGAAGAATAGAAATAAGTGCACTGTCTTATATCCTGCTTCTGCAAAGGCTAGCAATGAGATTGAGGAGGAGCTTTCAAATCGTGGATTTGAGGTCACACGGCTGAATACATACACAAcgATACCAGTTCAACATGTTGACGAAATGGTTCTGAAGCAGGCCCTCACTGTTCCTGTTGTTGCAGTAGCTTCTCCTTCTGCAGTTCGTGCCTGGAAGAACCTTGTTCCTGTATCAGGGTGGAGCAATGCTGTTGCATGCATTGGTGAGACAACTGCCGCAATGACAAGAAGTTTAGGCTTCAGAAATGTGTACTACCCAACTCAACCAGGCCTTGAAGGCTGGGTACAAAGCATTCTTGAAGCTTTAGGAGCACATGATCAGTTATTGTGTTA 902 0.4545 MALVSLSPFSSAPSCLKLRRKIFLCTSSINAASATDSVSTFTSASTSNSMPKVVVTRERGKNGKLINALGKHEIDCLELPLIEHKQGPDFDRLPSVLSENSFDWIVLTSPEAGSVFLEAWKDAGAPHVKIGVVGAGTASILKEALQSSKQLLDVAFSPSKATGKVLATELPKNRNKCTVLYPASAKASNEIEEELSNRGFEVTRLNTYTTIPVQHVDEMVLKQALTVPVVAVASPSAVRAWKNLVPVSGWSNAVACIGETTAAMTRSLGFRNVYYPTQPGLEGWVQSILEALGAHDQLLC 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00747 300 Pfam Uroporphyrinogen-III synthase HemD 65 286 IPR003754 GO:0004852|GO:0033014
Bva10g00747 300 SUPERFAMILY HemD-like 51 293 IPR036108 GO:0004852|GO:0033014
Bva10g00747 300 Gene3D - 203 292 IPR036108 GO:0004852|GO:0033014
Bva10g00747 300 PANTHER UROPORPHYRINOGEN-III SYNTHASE, CHLOROPLASTIC 4 298 IPR039793 GO:0004852|GO:0006780
Bva10g00747 300 CDD HemD 53 288 IPR003754 GO:0004852|GO:0033014
Bva10g00747 300 Gene3D - 96 202 IPR036108 GO:0004852|GO:0033014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00747 Bva-Chr10 6086148 6090959 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00747 K01719 - gmx:100808086 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00747 10 6086148 6090959 Bva10g00747 10 6086148 6090959 ECH