Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00676 ATGAAGCGTACACTTTCCGGCGACGATTTGAAGATGAAAAAGGCAAAGCTGGTAGAGAATGATCGTGACAGCGGCGAGGTCTCTGAAAAGACTAGTGGGTCTGTGTATTTGGATGATAATCTGCTGTTCGAGGTGTTGAAGCACGTGGACGCCCGGTCGATGGCGATGGCGGCTTGCGTGAGCAAGCAGTGGCAGAAGACGGCGCAGGATGAGCGGCTTTGGGAGCTGATCTGTACCAAGCAGTGGGCAAACACTGGTTGTAGCGAGCAACAGCTACGAACCGTGGTACTTGCGCTCGGTGGCTTCCGTCATCTCTACTCGCTTTTCCTCTGGCCTCTCTCAAAGCCTCAATCATCATCTTCGGCGTCGTCTTGGGCTGCGTTCCCTCAGATGATTCGGTCAAAGCCTGCCCGGTGGGGGAAAGACGAGGTTCACCTCTCTTTGTCGCTCCTCTCTATTCGCTATTATGAGAAGATGAATATCAATAACAGAAGCAGATA 500 0.524 MKRTLSGDDLKMKKAKLVENDRDSGEVSEKTSGSVYLDDNLLFEVLKHVDARSMAMAACVSKQWQKTAQDERLWELICTKQWANTGCSEQQLRTVVLALGGFRHLYSLFLWPLSKPQSSSSASSWAAFPQMIRSKPARWGKDEVHLSLSLLSIRYYEKMNINNRSR 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00676 166 SUPERFAMILY F-box domain 35 83 IPR036047 GO:0005515
Bva10g00676 166 PANTHER F-BOX PROTEIN GID2-LIKE 4 163 - -
Bva10g00676 166 Gene3D - 26 134 - -
Bva10g00676 166 PANTHER F-BOX ONLY PROTEIN 48-RELATED 4 163 IPR045118 GO:0019005|GO:0031146
Bva10g00676 166 Pfam F-box-like 40 80 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00676 Bva-Chr10 5718993 5719896 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00676 K14495 - gmx:100527591 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00676 10 5718993 5719896 Bva10g00676 10 5718993 5719896 ECH