Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00645 ATGTCGAATCGATATTCACAGGGTAGGCAAGACAGTAACAAGGGTTTTgccaaaacccagaaaaaatTTGTCCCAAAGAACATGAATTCAAACAGTAATAAAGGATCAAATCCAACTCTCTCAAGCTCCCTCCGACAATCGTTTTCCACGAAGCAATCGGTTGGTCCACCTGGGAGCAGTCGTTCCGTTTCTACATCGTCGGGTAGGGTTCAAGTGGCGGACGACAATGAAGAATGGGTATCAAATAGAACTCATGGTGGGAAATTTGTAAATTACTTGCCACAAGATGAGGCGGTGGCAGCTGGGCTTGGCGTTGAGGAAGGAGGATTGGATCCCTTGGAATCCCAGAGAATTGTCGATCTTCTGAATAGAGAGCTGTCTCGCTTGCTCAAGTTGAAACCAAGGGAATTTTGGAAAGAAGTTGCTAGTGACACCTCATTGCATGAGTTTCTGGACAGCTTCCTACTATTTAGGAGTAGATGGTATGATTTCCCTCACCGTGGAGCCAAAGGAATAGTAGCTGGGGTTATTGTTGGCGAGCTTGATTTAAGTCGGCGAGTTTTCATGGTATTGTATCGCATCTCTTCCAATAAAGATCCCAGTGCTCGGGTTGCTGATAGCCTCAGTCCCAGAGACCACGGAGTTCTTTTGCAGGAGAAGCAGTTGCTTGACGTGCCAAAGTTGTTGGATGTTTGTGCCATATATGGtcatgaaaatgaagagttGACCAGATTGCTGGTCAGAAACGCTTTAAAGGCTCAGCCTTTGCTCCATGATAATCTGACTGCAGTGATATCACATTTTCTAGGAATTATTCACACGATGGAAGAACGTTGCAGGGCGTCATTGGAGgtcttattttcttctggaAAACCTGATATACACAGTACAACTCAACTTCAAGCTGATCTGTTGGAGGTGATGGACTTTATTAATGATGCAACTGTATCAATGGATGCTTTTGTTAGTGCCTATAAAACAGCAgctatattcttttcttgccCAGTTGAAATGAGTTATGGAAATGAGGAACTGTTAAGCCTCCTTGCTAGATTGCATGACTCTCTACTTCCATCCTTGCAAAAGGGCTTCCGTATTATTTTTGCTGATGGACAAGATGGAACAGTatctaaaataatagtaaGTTTGAAGATGCTACGGATGAGATTGGTGAAGTTCGGTTGGCAATTATTGCTTTTTTGCTATCTGAGTGATGAAGTGTTCGGAGATAGCATGCCTCTTCCAGCTGCCACGAAGATGTTTCCTGCCAATGTGGAGGACCCAGTTATCAGAGCAGATATTCTGGTTCAAACATTTAGGGAGATCAACGCAGTTTCACTGTGTTTTCAGGAGAACCAGCAAAAGGAAATATTCCTTCAACATGTTGAAAAGAATTACAATATATTAAGCAGAGTTAAGAGCTTACAGGATAATGGATGGATATCCATTGATGACGAACATTTCCAATATATATCTGGGATTGTGACTTCTGCCAAAGGACTAAATTCTGAGACCCCTGCAATGAGCAAAACACAGCAGATGGATGAAGACGCTGCAATTCTAGAGTCCAGAATCAGTCAAATAAGGGACCTGTTCCCTGATTATGGTAAAGCGTTTTTAGCTGCATGTCTTGAAGTCTATGACCAGAATGAAGAAGTGGTTATTCAAAGAATTTTAGAGGGAACCCTCCATGAAGATCTTCAAAGCTTGGACACATCACTAGAGTCACTGCCACCACCCCAGCCTACCACTGTGGGGAGGAATGATAAAGGAAAAGGTATAGTTGTTGACTCCGTGGCAGTGTCCTCGAATAATGCAACAGCTGTGGGCGGGAAGCAACAGACAAAGGAGCCTTTGATTTCATCCTCCTCTTCACTTGGAAAATTTGTCAGGAAATCTAAAGCTGTGGACTTATCTGATCCCCGTATTCTGGATAAAAAGGATGAAGAAGATACATTAAGAACTGCTGCTCTAGTTTCacaatatgaatatgaagatGAATACGATGACTCCTTTGATGACTTGGGTCTGAGTGTTGCAGACGCAGgagtggaagaaaatgaaatattggGCGAGGAAGGAAACTCAAAATTGGCGAAACCATGGACAATCGAGACTGGAAATTCTGTTCAAAATGCCCCAATTTCGAAATGGGGCTCTAGGAAAAAACCGCAGTACTATGTCAAGGATGGTAAGAATTACAGCTACAAAGTGGCAGGTGCAATAGCAGTTGCAAATTCTGATGAAGCTACACTAGTTACTCAAGCTCAGGAAGAATTAATATATGGTCTTGGACGTGGTGGGAACTTTCCTGCCGGTGCATTAAAGAAGCTAACAGATTCCTATAAGGAGGATGACCACCAATCGCATGTTTCTGAAGCAGAAGGTAGACAAATTTTGGGGAATCCTGGAGGCAGGGGAAGGAAAGGAGCGGGAAAGTCAATTGAACCTCGTGAGCAACAGGGAAAACAATCGATGGATATACCCGAGGCGGAAAAAGAAGGGAATAAGTCAAGTTACAGAGGGAGAGGAAGAAGGGGAGGTGGACGGAGCAATCATTACAGGAAGGACCAAGCCATGAAGAAGCATTTCTCTGGTTTGGGTGGTTATTA 2612 0.4165 MSNRYSQGRQDSNKGFAKTQKKFVPKNMNSNSNKGSNPTLSSSLRQSFSTKQSVGPPGSSRSVSTSSGRVQVADDNEEWVSNRTHGGKFVNYLPQDEAVAAGLGVEEGGLDPLESQRIVDLLNRELSRLLKLKPREFWKEVASDTSLHEFLDSFLLFRSRWYDFPHRGAKGIVAGVIVGELDLSRRVFMVLYRISSNKDPSARVADSLSPRDHGVLLQEKQLLDVPKLLDVCAIYGHENEELTRLLVRNALKAQPLLHDNLTAVISHFLGIIHTMEERCRASLEVLFSSGKPDIHSTTQLQADLLEVMDFINDATVSMDAFVSAYKTAAIFFSCPVEMSYGNEELLSLLARLHDSLLPSLQKGFRIIFADGQDGTVSKIIVSLKMLRMRLVKFGWQLLLFCYLSDEVFGDSMPLPAATKMFPANVEDPVIRADILVQTFREINAVSLCFQENQQKEIFLQHVEKNYNILSRVKSLQDNGWISIDDEHFQYISGIVTSAKGLNSETPAMSKTQQMDEDAAILESRISQIRDLFPDYGKAFLAACLEVYDQNEEVVIQRILEGTLHEDLQSLDTSLESLPPPQPTTVGRNDKGKGIVVDSVAVSSNNATAVGGKQQTKEPLISSSSSLGKFVRKSKAVDLSDPRILDKKDEEDTLRTAALVSQYEYEDEYDDSFDDLGLSVADAGVEENEILGEEGNSKLAKPWTIETGNSVQNAPISKWGSRKKPQYYVKDGKNYSYKVAGAIAVANSDEATLVTQAQEELIYGLGRGGNFPAGALKKLTDSYKEDDHQSHVSEAEGRQILGNPGGRGRKGAGKSIEPREQQGKQSMDIPEAEKEGNKSSYRGRGRRGGGRSNHYRKDQAMKKHFSGLGGY 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00645 870 ProSiteProfiles CUE domain profile. 520 563 IPR003892 GO:0043130
Bva10g00645 870 MobiDBLite consensus disorder prediction 823 841 - -
Bva10g00645 870 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 11 868 - -
Bva10g00645 870 MobiDBLite consensus disorder prediction 781 870 - -
Bva10g00645 870 CDD CUE_ASCC2 522 561 IPR041800 -
Bva10g00645 870 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 11 868 - -
Bva10g00645 870 SUPERFAMILY UBA-like 521 576 IPR009060 GO:0005515
Bva10g00645 870 Gene3D - 520 563 - -
Bva10g00645 870 Pfam CUE domain 525 562 IPR003892 GO:0043130
Bva10g00645 870 MobiDBLite consensus disorder prediction 1 76 - -
Bva10g00645 870 SMART cue_7 520 562 IPR003892 GO:0043130
Bva10g00645 870 MobiDBLite consensus disorder prediction 23 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00645 Bva-Chr10 5599015 5604557 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00645 K18667 - gmx:100778129 1124.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00645 10 5599015 5604557 Bva10g00645 10 5599015 5604557 ECH