Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00625 ATGGGGGAACTGGGTTTGAAGATTGGCGTTATGGTGATGATGTGGTCATATTCATGTGGGGCGAGCAACAAGGTTCACCCGCTAGTCCTGATACCTGGCAATGGCGGCAACCAACTAGAAGCAAGGTTAACCTCTGAGTACAAGCCCACAAGCCTCTTCTGCAACAGATGGTACCCACTTGCGAAGGACGAGAATGGTTGGTTCAGGCTCTGGTTTGACCCCTCCGTCTTCTTAGCTCCCTTCACTAAATGCTTTGCTGAGCGCATGATGCTTTATTACCACCCAAAACTCGATGATTATCGTAATGCTCCAGGGGTCGAGACCCGGGTCCCCCACTTTGGTTCCACACAGTCCCTTCTTTATCTTGATCCTTATCTCAAGCATGCTACAGCATACATGGCACCCCTCGTAGAATCCCTGACACAGATTGGTTATGTGAATGGTGAAACTCTGTTCGGAGCTCCATATGATTTTCGTTATGGCTTGGCTGCAGAAGGTCACCCATCCCAAGTGGGCTCAAAGTTCCTTGAAGACCTAAAGAATTTAATAGAAGGAGCAAGCAGTTCCAACGCCGGAAGACCGGTAATACTAGTCTCCCACAGCTTAGGGGGTCTCTATGCGCTTCAGCTTCTGAACCGAAACTCAATCTCTTGGCGCAGGAAATTCATCAAACACCTTGTGGCCATTTCTGCGCCATGGGGTGGCACCGTTGACGAAATGCTCACCTTCGCTTCGGGGAGCACACTGGGGCTACCCGTGGTGGACCCATTGATAGTGAGAGGAGAGCAGAGAAGCTCCGAGAGCAACCTCTGGCTCCTGCCGAATCCGAAATTATTTGGTCGTGACAAAACATTGGTTACtactaaaaatagaaattactcTGCGCATGACATTGCTGATTTCCTTAAGGACATTGGATTCCCAGAAGGGGTTTATCCTTTTGAGAATCGCATATTGCCGTTGATGGATAAGATAGAGGCGCCACGAGTGCCTATAACTTGTGTCATAGGCAGCGGAGTGAAAACACCAGAGACTCTGTTTTATATGACTGGTGATTTTGATGAACAGCCGGAAATTAGTTATGGGGACGGAGATGGCACGGTGAATATGGTGAGCTTGGTGGCGCTTCAATCACTTTGGGCTCATCGGGGAAATCAAACCGTGCGAGTGACCAGAATTGGAGGGGTGTCTCATACGTCCATTCTTAAAAATGAAGCTGCGCTTAAGGAAATAATTGGTGAGATTAGTAGAATCAATTTACACGGTGCGCCCTA 1274 0.4804 MGELGLKIGVMVMMWSYSCGASNKVHPLVLIPGNGGNQLEARLTSEYKPTSLFCNRWYPLAKDENGWFRLWFDPSVFLAPFTKCFAERMMLYYHPKLDDYRNAPGVETRVPHFGSTQSLLYLDPYLKHATAYMAPLVESLTQIGYVNGETLFGAPYDFRYGLAAEGHPSQVGSKFLEDLKNLIEGASSSNAGRPVILVSHSLGGLYALQLLNRNSISWRRKFIKHLVAISAPWGGTVDEMLTFASGSTLGLPVVDPLIVRGEQRSSESNLWLLPNPKLFGRDKTLVTTKNRNYSAHDIADFLKDIGFPEGVYPFENRILPLMDKIEAPRVPITCVIGSGVKTPETLFYMTGDFDEQPEISYGDGDGTVNMVSLVALQSLWAHRGNQTVRVTRIGGVSHTSILKNEAALKEIIGEISRINLHGAP 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00625 424 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Bva10g00625 424 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-LIKE 1 16 418 - -
Bva10g00625 424 SUPERFAMILY alpha/beta-Hydrolases 24 415 IPR029058 -
Bva10g00625 424 Pfam Lecithin:cholesterol acyltransferase 68 304 IPR003386 GO:0006629|GO:0008374
Bva10g00625 424 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 16 418 - -
Bva10g00625 424 Gene3D alpha/beta hydrolase 75 315 IPR029058 -
Bva10g00625 424 Gene3D alpha/beta hydrolase 323 417 IPR029058 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00625 6 419 Acyl Lipid Metabolism Gene Families AT1G27480 59.952 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00625 - - qsu:111987397 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00625 10 5491921 5493455 Bva10g00625 10 5491921 5493455 ECH