Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00623 atgtcatGGTTGGCTCGCTCTCTGGCAAATTCCCTCCGGATCGATGACGACGACGGAGACGGTGATGGAGAAGATGATGAGGAAAACGACGTTATGCCAGATCGTTGTCATTCGCACGACGCGCCAACCACTTCACCCGCAATGCATGAACCCCGTTACCCACCGGAAGAAGAGCAACAACCTTCATACCAACcgcaagaaaatgaaattgaatcaGAAACGGAAGCACAAGCCCGGGGAGTCAAAGATGACCTAAATGAAATCAAGCAAACCCTAACCCGCCAATTCTGGGGGATGGCATCTTTCCTAGCTCCGCCCCCCACACATTCCCATCCTTCTTCTCCCGATTGTCAAATCCAATCCGATCCCACTACGTTCAGTTGGAATCGATCAGAGCCGTCTGATCACCGTGTCTCTGGAAACGAAGAGGGTTTCATTGCTCAAGATGACACTGCAATTTCCAGAATTCGGAGAGACTTTCCTGATACCGAAGTAAGGTTCAGTACCGAGGGGCATGAAATCAAGGGAAGCGGCTCGAATTTGAATTCATTTGAATCGGATTCTGTAGAAAATGAGGAATCGGAAATGGAGGACTATGATCTCGAACGTGCAGTTGGAATTACAGAAGAGGTGTTGGCCTTCGCCATGAACATTGCGATGCATCCCGAGACGTGGTTGGATTTCCCTATTGACGAGGAAGAAGACACCGATGATTTTGACATGTCTGATGCTCAACAACAGCATGCTTTGGCCATTGAAAGGCTTGCTCCTAGATTAGCTGCTCTCAGAATTGAGCTGTGCCCTTGCCATATGAGTGAAGGTTACTTTTGGAAAGTCTATTTTGTGCTTCTGCATTCAAGGCTTAATAAACAAGATGCAGAGGTTTTATCTACACTCCAGGTAATGGCGGCCAGAGCAATGTGGATGCAGGAGTTGCAGAAGCAAATGAAGCCAGAATCTGACTGGTTTGAAAGCAGGACTTCCTACTCAAGAGACACTGCACGATACGAATCAGGCACGTTATCCATGATGGCAGACTATGACTATGAGACGGAGAAACATACAGTTGCTAGTTCTGAAATACATTATATCGATAAGTCTGTTATTGAGGAAAAACCAATGATTAAAACTGAGGATAAGGATCTAGTCAGTGGTCGATCGTCCAAGATTATTCTTCTGGACTGTGAAGATGATGAGGATGAATGGCCAGAGGAAGATTCTGATTTAGGTGGTTATGGGGGAACTATCAACCCCATGGTGAATGAAGAAGATATATCTTTCAGTGATCTGGAGGATGATAATTATGAGTTGAAACCTGTCAGATCGAATACAGAATCAAAAGCGTCTAAAACTTG 1355 0.448 MSWLARSLANSLRIDDDDGDGDGEDDEENDVMPDRCHSHDAPTTSPAMHEPRYPPEEEQQPSYQPQENEIESETEAQARGVKDDLNEIKQTLTRQFWGMASFLAPPPTHSHPSSPDCQIQSDPTTFSWNRSEPSDHRVSGNEEGFIAQDDTAISRIRRDFPDTEVRFSTEGHEIKGSGSNLNSFESDSVENEESEMEDYDLERAVGITEEVLAFAMNIAMHPETWLDFPIDEEEDTDDFDMSDAQQQHALAIERLAPRLAALRIELCPCHMSEGYFWKVYFVLLHSRLNKQDAEVLSTLQVMAARAMWMQELQKQMKPESDWFESRTSYSRDTARYESGTLSMMADYDYETEKHTVASSEIHYIDKSVIEEKPMIKTEDKDLVSGRSSKIILLDCEDDEDEWPEEDSDLGGYGGTINPMVNEEDISFSDLEDDNYELKPVRSNTESKASKT 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00623 451 ProSiteProfiles BSD domain profile. 233 288 IPR005607 -
Bva10g00623 451 PANTHER BSD DOMAIN-CONTAINING PROTEIN 336 449 - -
Bva10g00623 451 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 335 - -
Bva10g00623 451 MobiDBLite consensus disorder prediction 398 451 - -
Bva10g00623 451 SUPERFAMILY BSD domain-like 206 293 IPR035925 -
Bva10g00623 451 MobiDBLite consensus disorder prediction 431 451 - -
Bva10g00623 451 PANTHER BSD DOMAIN-CONTAINING PROTEIN 336 449 - -
Bva10g00623 451 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 335 - -
Bva10g00623 451 SMART wurzfinal6 236 288 IPR005607 -
Bva10g00623 451 Pfam BSD domain 236 292 IPR005607 -
Bva10g00623 451 MobiDBLite consensus disorder prediction 1 82 - -
Bva10g00623 451 Gene3D BSD domain 202 298 IPR035925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00623 Bva-Chr10 5483312 5487227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00623 206 288 EF-hand Containing Proteins AT1G69030 30.108 7.54e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00623 - - jre:109006948 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00623 10 5483312 5487227 Bva10g00623 10 5483312 5487227 ECH