Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00603 ATGAACCTTGCTGCTCTCTTAACTTCTGCTGGAATTAATATTGCTGTTTGCATCGTGCTCTTTTCACTCTATTCAATATTAAGGAAACAGCCAGGCAATGCTAATGTATACTTTGGACGGAGGCTCGCCTCTCAGAATACAGTACGCATTGATGCATGTTTGGAAAGATTTGTTCCCTCCCCGAGCTGGATAATGAAAGCATGGGAGAGTACTGAAGATGAAATACTCGCTATCGGTGGCTTGGATGCTGTGGTTTTTGTCAGGATTCTTGTGTTCAGCATTCGAGTATTTTCCATTGCTGCCATCATCTGTACTATTCTCGTGCTTCCAGTCAATTATTATGGCCAGGAAATGCAGCACAAGAATATTCCTTTGGAGTCACTGGAGGTATTTACCATTGAGAATGTCAAGGAAGGTTCAAAATGGCTTTGGGCTCATTGTCTCGCATTATATATCATAACTTGTGCCGCTTGTTCTCTCCTTTACTTTGAATTCAAGAGCATCACTAATATGAGGTTATTACATATTATTGGATCGCCTCCAAATCCTAGTCATTTTACAGTTCTTGTCCGAGCAATTCCCTGGTGTCCTGATGAATCCTACTCTGACACATTGAAAAAGTTTTTCTTGTATTATCATGGATCAAATTATTTGTCACACCAAATGGTTTACAGCTCTGGTACAGTTCAGACGCTAAAGAATGAAGCAGAGCATATGTCTAAGATTATAAAGAGCACTTCATTGGAAAAGACCTGTAGGCCAAGTTTTAAAGAATGTTGCCATCGTGGAGGACACACTAATTCTTTTAAGATTCTATCTAATGAGATATACGGTGTACAAGGGACACAAGGCTACAGTGACATGCATTTAAATGAAGGCGCAGCTGCTTTTGTGTTCTTTAGAACTCGGTATGGTGCTCTTACTTCTGCGCAGATTCTTCAGACATCAAATCCTATGTCATGGGTAACAGATCTTGCGCCGGAACCTCATGATGTTTATTGGTCAAACCTTTGTATACCGTATAGGCAACTTTGGATTCGTAAAATAGCTACTCTTGTGGCTTCTATCGCCTTTGTGCTTGTGTTTCTTATTCCAGTCACATTCGTACAAGGCTTAACTCAACTAGAACAGCTTCAACAAATGTTCCCCTTTCTGACAGGGATACTTCAAAAGAAGTTTGTGAGCCAGCTGGCAACTGGCTACCTACCAAGTGTGATtttgatgttatttttgtaCGCTGTTCCTCCAACAATGATGCTATTTTCAGCAGTGGAAGGGTCTGTTTCCCGTAGCGGAAGGAAGAAGAGCGCGTGTTATAAAGTCTTGTACTTCACTATCTggaatgtattttttgttaatgtttTAACCGGGTCGGTTCTCCGCCAACTCGCATTCTTTTCTAGTGTGAAAGAAGTGCCTGCTCAACTTGCCAAAGCGGTGCCAACACAGGCAACCTTTTTCATGACCTATGTTTTATCATCTGGTTGGGCAAGTTTGGCATTCGAAATTATGCagctttttcctcttttctgcAATCTATTCCAGAAATATATTCTCAGACTTGAGGATGACTCACAGAATGGCACCCTATCTTTCCCATACCATACCGAAGTTCCGAGGGTTTTACTATTTGGATTCCTTGGGTTCACCTGTTCTATTCTGGCACCATTAATGCTGCTATTCTTAATGGTTTACTTTTTCCTTGCTTACCTTGTATATAGAAACCAGATTCTCAATGTCTATATTTTCAAGTATGATAGTGGAGGACAGTTCTGGCCTGTTGTTCACAAGACAACCGTCTTTTCATTGGTCTTGACACAAGTCATCGCTCTTGGGGTTTTTGGAATAAAACGTTCGCCAGTTGCATCTGGATTTACCATTCCGCTGCTTATTTGTACCATTCTGTTTCACGAGTATATTAGGCAGCGATTTCTTCCCGTATTCAAGCATAGTTCAGCACAGATTCTCATGGACTTGGACCGGAAAGATGAGCTCAGTGGAAAGATGGAAGAGATTCATGAACAGTTGCGTTCAGCCTACTGCCAGTTTGTTGTACCATCGCCCGGCTCGAGTAAATCTGAATGCTCCAGTCATCACAAGGAAGAGGATCCTGAAAATGGGAGACAGGTAAGGAACCAAACCAAAGGAATGGATCGTGGAATATACTGTCCCCGGGAGAAGTA 2183 0.4086 MNLAALLTSAGINIAVCIVLFSLYSILRKQPGNANVYFGRRLASQNTVRIDACLERFVPSPSWIMKAWESTEDEILAIGGLDAVVFVRILVFSIRVFSIAAIICTILVLPVNYYGQEMQHKNIPLESLEVFTIENVKEGSKWLWAHCLALYIITCAACSLLYFEFKSITNMRLLHIIGSPPNPSHFTVLVRAIPWCPDESYSDTLKKFFLYYHGSNYLSHQMVYSSGTVQTLKNEAEHMSKIIKSTSLEKTCRPSFKECCHRGGHTNSFKILSNEIYGVQGTQGYSDMHLNEGAAAFVFFRTRYGALTSAQILQTSNPMSWVTDLAPEPHDVYWSNLCIPYRQLWIRKIATLVASIAFVLVFLIPVTFVQGLTQLEQLQQMFPFLTGILQKKFVSQLATGYLPSVILMLFLYAVPPTMMLFSAVEGSVSRSGRKKSACYKVLYFTIWNVFFVNVLTGSVLRQLAFFSSVKEVPAQLAKAVPTQATFFMTYVLSSGWASLAFEIMQLFPLFCNLFQKYILRLEDDSQNGTLSFPYHTEVPRVLLFGFLGFTCSILAPLMLLFLMVYFFLAYLVYRNQILNVYIFKYDSGGQFWPVVHKTTVFSLVLTQVIALGVFGIKRSPVASGFTIPLLICTILFHEYIRQRFLPVFKHSSAQILMDLDRKDELSGKMEEIHEQLRSAYCQFVVPSPGSSKSECSSHHKEEDPENGRQVRNQTKGMDRGIYCPREK 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00603 727 PANTHER ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN 2 720 - -
Bva10g00603 727 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 2 720 IPR045122 GO:0005227
Bva10g00603 727 Pfam Cytosolic domain of 10TM putative phosphate transporter 185 336 IPR027815 -
Bva10g00603 727 Pfam Late exocytosis, associated with Golgi transport 6 164 IPR032880 -
Bva10g00603 727 MobiDBLite consensus disorder prediction 687 727 - -
Bva10g00603 727 MobiDBLite consensus disorder prediction 694 709 - -
Bva10g00603 727 Pfam Calcium-dependent channel, 7TM region, putative phosphate 347 614 IPR003864 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00603 Bva-Chr10 5353334 5359975 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00603 K21989 - gmx:100796574 1090.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00603 10 5353334 5359975 Bva06g02195 06 14397213 14405255 BWGD
Bva10g00603 10 5353334 5359975 Bva10g00603 10 5353334 5359975 ECH