Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00570 ATGTCCTCTTCTTCTACGGTAAAAGACGCCGAGAATCTGCGTCGCAGCCGTATCCTTTCAAGCAAGCTCTACTTCGATGCACCTCTCTCCAAGGTTCCCCTTATCTACTCAGAGTCCTACGATATATCGTTTCTCGGCGTAGAGAAACTGCACCCATTTGATTCATCTAAGTGGGGACGCATTTGTCGATTCCTCATCTCAATTGGTATTCTACACAAAAATAGCATTATTGAGCCTTTGGAAGCCTCAAAAGATGATCTTCTGGTGGTTCATTCAGAATCATACTTGAATAGCCTGAAGAACAGTTCTCGTGTTGCTATGATAATTGAGGTCCCTCCTGTGGCACTATTTCCCAATTGCCTTGTGCAGCAAAAAGTTCTTTTCCCCTTCCGGAAGCAGGTTGGGGGAACAATATTGGCAGCAAAACTTGCAAGGGAGAGAGGATGGGCGATCAATGTAGGAGGAGGTTTCCATCATTGTTCTGGTGAAAATGGAGGAGGATTCTGTGCATATGCAGATATTTCTTTGTGTATCCACTTTGCTTTTGTTCGACTTGATATATCAAGGGTGATGATCGTTGATCTTGATGCACATCAAGGAAATGGTCACGAAATGGATTTTGCCAGTGACaGCCGGGTCTATATCCTGGATATGTACAATCCCGGAATATATCCTTTTGATTATGAGGCAAGGAGGTATATAGATCAGAAAGTTGAAGTACAGAGTGGGACACTTACAGAAGAGTACTTGGAGAAATTAGATGAAGCACTTGAGGTTGCCGGGCGAAGGTTTGACCCTGAGTTGATAGTTTATAATGCTGGAACTGACATCCTAGATGGTGATCCATTAGGCAGGTTGAAGATCAGTCCTGAAGGGATCGCTTTGAGAGATGAGAAAGTTTTTAGATTTGCTCGTGAGAAGAACATTCCTATTGTCATGCTCACATCAGGTGGTTACATGAAGTCCAGTGCCAGAGTGATCGCAGATTCCATAGTCAATCTGTCGAAGAAATGCTTGATAGATACGGGTAAAGGTTCAAAGGCTACATA 1049 0.4337 MSSSSTVKDAENLRRSRILSSKLYFDAPLSKVPLIYSESYDISFLGVEKLHPFDSSKWGRICRFLISIGILHKNSIIEPLEASKDDLLVVHSESYLNSLKNSSRVAMIIEVPPVALFPNCLVQQKVLFPFRKQVGGTILAAKLARERGWAINVGGGFHHCSGENGGGFCAYADISLCIHFAFVRLDISRVMIVDLDAHQGNGHEMDFASDSRVYILDMYNPGIYPFDYEARRYIDQKVEVQSGTLTEEYLEKLDEALEVAGRRFDPELIVYNAGTDILDGDPLGRLKISPEGIALRDEKVFRFAREKNIPIVMLTSGGYMKSSARVIADSIVNLSKKCLIDTGKGSKAT 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00570 349 PANTHER HISTONE DEACETYLASE 11 5 344 - -
Bva10g00570 349 PANTHER HISTONE DEACETYLASE 11 5 344 - -
Bva10g00570 349 Gene3D Histone deacetylase domain 31 345 IPR037138 -
Bva10g00570 349 SUPERFAMILY Arginase/deacetylase 31 334 IPR023696 -
Bva10g00570 349 CDD HDAC_classIV 51 334 IPR044150 GO:0004407|GO:0016575
Bva10g00570 349 Pfam Histone deacetylase domain 51 332 IPR023801 -
Bva10g00570 349 PRINTS Histone deacetylase superfamily signature 155 178 IPR000286 -
Bva10g00570 349 PRINTS Histone deacetylase superfamily signature 266 276 IPR000286 -
Bva10g00570 349 PRINTS Histone deacetylase superfamily signature 189 204 IPR000286 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00570 K11418 - gmx:100781276 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00570 10 5170550 5175493 Bva10g00570 10 5170550 5175493 ECH