Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00559 ATGGGAGAACCCAGAAAGTACATTTCACAGCAAGAGCTTAGCAAACACAACAAACGAGGAGATCTATGGATCTCTATTCAGGGAAAGATCTACAATGTCTCCGATTGGGCTGATGAGCACCCCGGCGGTGAGCTTCCGTTGTTCAGTCTTGCTGGTCAGGACGTCACTGACGCTTTCGTCTCTTACCATCCGGGCAATGCATGGCAATACCTTGACAAATTCTTCACTGGGTACTATCTACAGGACTATTCTGTCTCTGAGGTATCTAAAGATTACCGAAAGCTTGTTTCCGAGCTGTCCAAATTGGGTTTATTTGAGAAGAAAGGACACTGTGTGTTCTTTACACTCTGCTTTATGGCATTGTTGTTTTCATTGAGTGTTTATGGTGTTTTGTGCTGTACTAGCCCATGGGTGCATGTCGCATCTGGTGGAATAATGGGGTTCATGTGGATTCAGAGTGGGTGGATGGGGCATGACTCTGGGCACTACCAGGTTATGGCAACCCGAGGTTTCAATCGCTTCGCTCAGATCCTTTGTGGGAACTGCCTTGCGGGAATCAGTATTGCGTGGTGGAAGTGGAACCACAACGCCCATCACATTGCCTGTAATAGTCTTAATTACGATCCAGATCTTCAGCATATGCCCTTTTTCGTGGTATCTTCGAAATTTTTCAATTCTCTCAGGTCTTGCTTCTATGAGAGGGAGATGAAGTTTGATTCTGTTGCTAGATTCTTGGTTAGCTACCAACATTTGACTTTTTATCCTGTAATGTGCTTTgctagaattaatttattcgcCCAATCTTTCGCCTTACTGTTGTCCAAGAGAAAGGTACCCCAGAGAGGCCAAGAGCTTTTGGGGATGCTTGTTTTTTGGATCTGGTATCCTCTGCTGGTTTCATGCTTACCCAATTGGGTTGAAAGGATATTGTTTGTCGTTGCCAGTTTTTCGGTAACTGGAATCCAACACGTTCAATTCTGTTTGAATCATTTCTCAAGCAGTGTGTTTGTTGGCCCGCCGAGTTCGAACGATTGGGTTGAAAAGCAGACTAGTGGCACGCTTGATGTAAAGTGCCCTGCTTGGATGGATTGGTTTCATGGTGGATTGCAATTTCAGGTGGAGCATCATCTGTTTCCCCGATTGCCCAGGTGCCACCTGAGGAAAATCTCACCTTTGGTGAAGGAGCTGTGCAAAACGCATAATTTGCCTTATAACTGCGTGTCATTCTGGAAAGCCAATGTACTGACATGTAAGACACTCTACAGTGCCGCAGTGCAGGCTCGTGATCTATCTAATCCTATTCCCAAAAATTTAGTTTGGGAAGCTGTTAATACTCATGGATG 1343 0.4453 MDWFHGGLQFQVEHHLFPRLPRCHLRKISPLVKELCKTHNLPYNCVSFWKANVLTCKTLYSAAVQARDLSNPIPKNLVWEAVNTHG 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00559 86 Pfam Fatty acid desaturase 2 45 IPR005804 GO:0006629
Bva10g00559 86 PANTHER DELTA(8)-FATTY-ACID DESATURASE 2 1 85 - -
Bva10g00559 86 PANTHER FATTY ACID DESATURASE 2 1 85 IPR012171 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00559 Bva-Chr10 5122769 5124718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00559 1 86 Lipid Metabolism Gene Families AT2G46210 74.419 9.12e-44 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00559 K21737 - gmx:100776476 171.785