Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00551 ATGGGTTCCTCACAAGGGTCTACATTGTCGGCAAATGTGGCTGGTATAGTCGATAATTCATCACTTCACATGCACAGAGAGGAATCCTACCTTGATGGGATGCCTGTATATGTTAAGGAACTGATTGCTGGTGGGTGTGCTGGTGCACTTTCTAAGACAGCTGTTGCACCCCTGGAACGGGTCAAAATTCTCTGGCAGACGAGGACTGCAGGATATCACAATCTGGGCGTTTGTCAATCTTTGAATAAGTTACTAAAGAATGAAGGTTTTCTAGGATTGTATAAAGGAAATGGAGCTAGTGTTATAAGAATTATTCCTTATGCAGCCTTGCATTTTATGACATATGAACGGTATAAGTGTTTCCTCTTGAATACCTGTCCTATGTTAGGATCAGGCCCCGTTGTTGATCTTTTGGCTGGTTCCGCAGCGGGAGGAACTTCGGTTTTATGTACCTATCCCTTAGATCTTGCTCGTACCAAACTTGCTTATCAGGTGACAGAACAAAGAGGAAGTATCGAAGAGGGTATGAAAGGAGTTCATTCTCAACCTTCATCTAATGGCATTAAAGGTGTACTTAGAAGTGCCTACAAGGATGGAGGAGTTCGTGGCCTTTATAGGGGTGTAGgaCCAACCCTTACTGGAATTCTTCCGTATGCTGGTTTGAAGTTCTACATGTTTGAGGAACTGAAGATGCACATTCCTGAAGAACATCGAAAGTCCATCTTGATGCGCCTTTCTTGTGGAGCTCTAGCTGGCTTGTTTGGGCAGACTGTGACATACCCTTTAGATGTTGTTAAAAGACAAATGCAGGTCAACAGCCTGCAAAATTCAGCCCATGCTGATACTGAATACAAGAACACATTTGGGGTACTTAGGACGATTGTTCGTAATCAAGGATGGAGACAGTTGTTTGCAGGTGTAAGCATCAATTATATCAGGATTGTTCCTTCAGCGGCAATTAGTTTCACCACGTATGACATGATGAAAGGTTGGCTTGGCGTGCCACCCCAACAGAGGTCGAGATA 1025 0.4371 MGSSQGSTLSANVAGIVDNSSLHMHREESYLDGMPVYVKELIAGGCAGALSKTAVAPLERVKILWQTRTAGYHNLGVCQSLNKLLKNEGFLGLYKGNGASVIRIIPYAALHFMTYERYKCFLLNTCPMLGSGPVVDLLAGSAAGGTSVLCTYPLDLARTKLAYQVTEQRGSIEEGMKGVHSQPSSNGIKGVLRSAYKDGGVRGLYRGVGPTLTGILPYAGLKFYMFEELKMHIPEEHRKSILMRLSCGALAGLFGQTVTYPLDVVKRQMQVNSLQNSAHADTEYKNTFGVLRTIVRNQGWRQLFAGVSINYIRIVPSAAISFTTYDMMKGWLGVPPQQRSR 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00551 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 131 232 IPR018108 -
Bva10g00551 341 Pfam Mitochondrial carrier protein 240 332 IPR018108 -
Bva10g00551 341 Pfam Mitochondrial carrier protein 37 123 IPR018108 -
Bva10g00551 341 Pfam Mitochondrial carrier protein 133 234 IPR018108 -
Bva10g00551 341 PANTHER SOLUTE CARRIER FAMILY 25 23 338 - -
Bva10g00551 341 Gene3D Mitochondrial carrier domain 35 333 IPR023395 -
Bva10g00551 341 PANTHER GRAVES DISEASE MITOCHONDRIAL SOLUTE CARRIER PROTEIN-LIKE 23 338 - -
Bva10g00551 341 PRINTS Mitochondrial carrier protein signature 53 67 IPR002067 GO:0055085
Bva10g00551 341 PRINTS Mitochondrial carrier protein signature 40 53 IPR002067 GO:0055085
Bva10g00551 341 PRINTS Mitochondrial carrier protein signature 146 164 IPR002067 GO:0055085
Bva10g00551 341 PRINTS Mitochondrial carrier protein signature 96 116 IPR002067 GO:0055085
Bva10g00551 341 PRINTS Mitochondrial carrier protein signature 205 223 IPR002067 GO:0055085
Bva10g00551 341 PRINTS Mitochondrial carrier protein signature 248 270 IPR002067 GO:0055085
Bva10g00551 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 239 331 IPR018108 -
Bva10g00551 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 35 121 IPR018108 -
Bva10g00551 341 SUPERFAMILY Mitochondrial carrier 37 327 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00551 Bva-Chr10 5080644 5084688 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00551 113 341 Organic Solute Cotransporters AT1G14560 66.667 2.75e-111 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00551 - - gmx:100784421 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00551 10 5080644 5084688 Bva10g00551 10 5080644 5084688 ECH