Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00548 ATGTGGGAATCTATATGTTTAACGGTTATCGCCACCGCCGGTAACAACATCGGTAAGATCCTTCAGAAAAAAGGCACAATCATTCTTCCCCCTCTTTCTTTCAAGCTCAAGATCATAAGGGCGTATGCATTAAACAAAGCTTGGCTGATAGGTTTCATAATGGATATCTTTGGGGCATTGTTGATGTTAAAGGCATTATCTAAGGCTCCTGTCTCTGTTATCCAACCAGTATCTGGCTGCGGACTTGCAattctttcaatattttctcatttttatctgAAGGAAGTGATGAATGCTGTTGACTGGATAGGCATTACCTTAGCGGGTTTTGGCACAATAGGAGTTGGTGCTGGAAGTGAGGAGCAAGAAGCAGCTGCCCTATCCATTTTTCATATACCATGGCTCGCCTTTGTTGTTTTCATCTTGTTTGTACTCCTCAATGGATGGCTTCGCATTTGCAAACATCATCGAAGAGAGCAGGAGATGATGGAATATGATGTTGTTGAGGAAACCATTTACGGCTTGGAATCTGGAATTTTGTTTGGGATGGCATCTGTAATATCAAAGATGGGATTTCTGTTTTTGGAGCAGGGTTTTCATAAGCTGCTGGTTCCTGTGTGCATCATGATCAGTGTGTGTTGTAGTGGTACTGGATTTTACTACCAGACACGTGGTCTAAAGCATGGGAGAGCTATTGTGGTTTCTACATGTGCAGCTGTGGCATCAATTTTGACTGGTGTACTTGCCGGAATGCTTGCTTTGGGTGAACGACTCCCTTCTGCTCCAAATGCTCGTTTGTTACTTCTTCTTGGATGGCTACTTATTATTATGGGTGTGATTTTACTTGTTGGTTCAACACGTCTTATGCAATTCTTGCCATTGCCTTTACGACGCTTTAGTCGAAGCAGTGCTGATAAGAATTATGGCCGGGAGTA 935 0.4193 MWESICLTVIATAGNNIGKILQKKGTIILPPLSFKLKIIRAYALNKAWLIGFIMDIFGALLMLKALSKAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWIGITLAGFGTIGVGAGSEEQEAAALSIFHIPWLAFVVFILFVLLNGWLRICKHHRREQEMMEYDVVEETIYGLESGILFGMASVISKMGFLFLEQGFHKLLVPVCIMISVCCSGTGFYYQTRGLKHGRAIVVSTCAAVASILTGVLAGMLALGERLPSAPNARLLLLLGWLLIIMGVILLVGSTRLMQFLPLPLRRFSRSSADKNYGRE 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00548 311 SUPERFAMILY Multidrug resistance efflux transporter EmrE 190 285 - -
Bva10g00548 311 PANTHER UNCHARACTERIZED 1 308 IPR008521 GO:0015095|GO:0015693|GO:0016021
Bva10g00548 311 Gene3D - 4 122 - -
Bva10g00548 311 PANTHER MAGNESIUM TRANSPORTER NIPA9-RELATED 1 308 - -
Bva10g00548 311 Pfam Magnesium transporter NIPA 40 283 IPR008521 GO:0015095|GO:0015693|GO:0016021
Bva10g00548 311 SUPERFAMILY Multidrug resistance efflux transporter EmrE 25 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00548 Bva-Chr10 5069230 5073272 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00548 - - gmx:100803982 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00548 10 5069230 5073272 Bva06g02247 06 14672104 14676362 BWGD