Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00540 ATGAAACTCCCAACTTTTGCAGACCCAGAATCTCTCTCTCATATTTACAGCCTGCTCCAGAGTTCATTTGACCAAATGAATGAGAGCAACAATGGCAGTACCAGAAAACGACGCAGAAAAAACGAGAAAAATCGAGATGACCCCGATGGTTCATCCCAGAAAGAAGGggataagaagaaagaatggaAGGGTATTCTGACTTCATTGATATTGCTGGAAGAACAAGAGAAGCATGAGCAGGAAGAGCTTGACAAGGCCACCGAAGAGGATAAGCTATCCTTAGATGCGAACCATAAGAAGAAGACGAAAGCCATGTCGGAATACTATTCCAATCTTGAAGATTATTACTCTCACGTCGAAGAATCAGAGAGAATTATGAGAAAGAAATCTCGGGTCGTGGCTGGTGCGGTGGCCGTAGCTGCAGCTTCTGATGGGTTAGAAAAGGTTCAAATGGATAAAGGGCTTAAATCTGGAGCAGCCGGTGGGGGCCCCGTCTCCGGCCATCAGCGGCGACTATGGGTGAAGGACCGTTCGGGAGCGTGGTGGGATGAATGTAACAGGCCTGATTTTCCAGAAGAAGAGTTCAAAAAAGTATTCAGAATGGGAAGGGCAACCTTCGATATGGTTTGCGAGGAGCTCAATTCTGTGATTGCTAAAGAAGATACAACACTGCGAAACGCAATTCCTGTGAGGCAAAGAGTAGCCGTTTGTCTATGGAGGTTGGCCACTGGTGACCCTCTTCGACTTGTGTCTAAAAGGTTCGGTTTGGGCATATCAACCTGTCATAAGCTGGTTCTTGAGGTCTGTACAGCTATAAGAACTGTTCTAATGCCTAAGTATCTGCAGTGGCCTGATGAAGCTGCattgagaaaaatcaaaggtgaatttgaatcaatttCAGGGATACCCAATGTCGTAGGGTCTATGCATACTTCCCATATACCAATCATAGCTCCCAAGATTAGTGTGGCtgcttattttaataagcGGCACACAGAGAGGAATCAGAAAACTTCATATTCAATCACAGTTCAGGGTGTGGTTGACCCAAAAGGGGTGTTTACAGATGTGTGCATAGGTTGGCCTGGATCAATGCCTGATGATCAGGTGTTAGAAAAGTCTGCACTTTTCCATAGAGCCACTAATGGAGGATTGCTTAAAGGTGTTTGGATTGTTGGGAGTTCAGGGTACCCTTTATTGGATTGGGTTTTGGTGCCTTATACTCAGCAGAATCTTACTTGGACGCAGCATGcttttaatgagaaaattggAGAGATTCAAAAGGTTGCAAAGGATGCATTTGCGAGATTGAAAGGAAGGTGGAGTTGCTTGCAGAAGAGGACAGAGGTGAAGCTACAAGATTTGCCTATTGTCCTTGGGGCATGCTGCGTGCTGCACAATAtatgtgaattgcagaatgaagaaattgaTCCTGAGTTAAAGGTTGAGCTTTTAGACGATGACATGGTACCCGAGCAACCTTTGAGATCAGTAAGCTCCATGAAGGCTAGAGACGCAATTGCTCATAATCTTTTACACCATGGCCTCGCAGgcacttcttttcttta 1568 0.4222 MKLPTFADPESLSHIYSLLQSSFDQMNESNNGSTRKRRRKNEKNRDDPDGSSQKEGDKKKEWKGILTSLILLEEQEKHEQEELDKATEEDKLSLDANHKKKTKAMSEYYSNLEDYYSHVEESERIMRKKSRVVAGAVAVAAASDGLEKVQMDKGLKSGAAGGGPVSGHQRRLWVKDRSGAWWDECNRPDFPEEEFKKVFRMGRATFDMVCEELNSVIAKEDTTLRNAIPVRQRVAVCLWRLATGDPLRLVSKRFGLGISTCHKLVLEVCTAIRTVLMPKYLQWPDEAALRKIKGEFESISGIPNVVGSMHTSHIPIIAPKISVAAYFNKRHTERNQKTSYSITVQGVVDPKGVFTDVCIGWPGSMPDDQVLEKSALFHRATNGGLLKGVWIVGSSGYPLLDWVLVPYTQQNLTWTQHAFNEKIGEIQKVAKDAFARLKGRWSCLQKRTEVKLQDLPIVLGACCVLHNICELQNEEIDPELKVELLDDDMVPEQPLRSVSSMKARDAIAHNLLHHGLAGTSFL 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00540 522 PANTHER NUCLEASE 28 521 - -
Bva10g00540 522 Coils Coil 69 91 - -
Bva10g00540 522 MobiDBLite consensus disorder prediction 21 61 - -
Bva10g00540 522 MobiDBLite consensus disorder prediction 31 61 - -
Bva10g00540 522 Pfam DDE superfamily endonuclease 311 467 IPR027806 -
Bva10g00540 522 PANTHER UNCHARACTERIZED 28 521 IPR045249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00540 Bva-Chr10 5027705 5029663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00540 - - zju:107435536 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00540 10 5027705 5029663 Bva10g00540 10 5027705 5029663 ECH