Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00533 ATGGCGTCCAAATCTGGGCATGGAGACGCCGATGATTCTGGTGATTTCAATAATGGTAAGCTGTTGCGTGACATAGAGGAAATAAGCAAAGCTCTTTATTTGCACAAAACCCCTTCTAAGGCTTCCTTGCCCCCGTTTGATAATCGGTCTAAATCCGCCGGAAAAACCCGTTTATCGAGAGCTCAATTTAGCTCAAATCAACAATTTCTAAGGGAAGATCTATTGCCCAAGTATAAGAAGTCATCGTCACCTTGGAATTGGAAGAAACCCTTGAAAGCTCTCACGCATATTGGTCATCGCAAATTCAATtgttgtttcaattttcatgTACATTCAATTGAGGGGTTGCCTTCGAATCTCAATGGTGTTAGTTTATGCGTGcattggaaaaggaaaaacagtATTTTAAAGACGCGCCCTTCCCGGGTTTTCCAGGGTGTTGCGGAGTTTGACGAAACTTTGATGCATACATGTTCCGTTTATGGCAGCCAAAGTGGGTCTAATCACTCTGCCAAGTATGAGTCTAAGCTTTTCTTGATCTATGCTTCTGTTGTTGGGGTTCCTCAGCTTGACATAGGGAAGCATGAGGTTGATCTTACTAGGCTATTACCTTTGACTTTAGAAGAGTTAGAGGGTGATAGAAGTTCAGGGAAATGGACCACGAGTTTTAGATTGACCGGAAAGGCTAGGGGAGCTAATCTAAATGTTAGTTTCAGTTTTCACGTAATTAAGGATGATTTGATGAAACTGAGTGGTAGTGTGAATGCCCTCAACCTTATTAACTTGGATCAACGCATGCCAAGCGCCACAGGAAATGATGTGAATTTCAGTTCTAGCAACACAGACATGGTTCTTTGGCGGGGTGGGATAGTTCCGAATAAATTACATGATGGATCGATTCTCCCTTCTCATTCTGAGGATATGAGCACCGGCCATGAAGTATTGCTAGATTATGGTTCAGATTCTGGTTCAGGTCTTTCTAAATCAATCAAGTTACTGTATCAGAAAATTGATGAGAACTTTTATGACCCAGCCAGAGAAGATTCTGAATATGTGGGACCACTTGACTCTCCAACTCTTCTGAATTTAGAGCCAGATGAAGAATCAAATCAGTATGAGTTTGATTACCCTGAGTTTACCATTATTGAAAAAGGGATAGAAACGTTGGAAGACGatttcttgaaatttgatGGGAAAACTGTTCAAACTGTTGATATGTCTGCAGTTGAAACCATCGGTGTCGATGAGATTGTGAAGGATAATGGCATATCCTTCGTTAAgaacaaaatatgtaattcaAAGAATGAGATCCGCATTAATTGCATGGATGGAGATATCTTGGATGACAGCAAACACAAATGCAATAGCTCACTTATCATCCTACCAAGCATCGAAGAGCTGGATTCAGCTTCTATAACCTCAGACTTAGTAGCATCGAACCCTTCACAACCTATGAATGATTCTCTTGCCCAAGAACAGTACACCAATGTTAAATCAAACTATAAAGCGCATAAGATGGAGAGAAGGTCACATAGCTTGGATGATATCACTGAATCTGTGGCCAGTGATTTCTTAAATATGCTTCATATGGAGTCTAGTGGTTCATTTGGCTCGAGTTTTGATGGTGATCCTCAGTCACCCAGAGAGCAGCTTTTGAGAGAGTTTGAGAAAGAAGCTATTGCTTCAGGTAACTTCATTTTCGATTTTGATGCAAAAGAAGGGCAATTGGATTTTTGCTGCCCGGATCCGCTTGGATCTAGTTCTGAGGATTGTCCTGtggattttaatttgtctttaaTTGTTCAAGCTGCTGAAGAGGAGCATGCAAGGGCAAGtcaatcattaataaatagaaGGAAAGCCAAAATTCTTGAAGATCTGGAGACTGAGTCTTTGATGCTGCAGTGGGGCTTAAATGACAGGGACTTTCGAAATTCCCCACGAACCTGCTCTGGTGGATTTGGAAGTCCAATTGAGCTACCCTCTGAAGAATCATCTGCATTACCTTCTATTGGACCAGGTCTTGGTTCATTTATTCAAACTCAGGGTGGAGGTTTTCTGAGGTCTATGAGCCCTTCCCTCTTCTTAAGCGCCAAAAATGGTGGTAAATTAATCATTCAAGCTTCTAACCCAGTTGTTCTTCCTGCAAAAATGGGTAATGATATAATGGAGATACTATTGCAAGTGGCATCTGCTGGAGTTGAGGAGCTGTGTGATCATATCTATAGACTAATGCCTTTGCGTGATATCACtggaaaatcaattcaaaatatggCATGGGATGGAACAACCAGCACGGATGCTCCTGAAAGGCAGGACTTTGTGCAGCAAGaattatttgaagaatttgGACGGGATTCAGATTGTATCAAGAATGAGTTAAAAGAATTTCCATATGAAGTGCTGGGCTTGGACTACGTGCCTCTAGAAGACGTAGCTCCTATGACTATTGATAAGATCGAAGCCCTTTTCATAGAAGGGTTGAGAATACAGTCTGGCATGCCGAGTGAGGAGGCAACTTCATACATTCGTCCCCAATATCCGAAGATGTTTGCCTCTGGAGGCAGAGTAGCCGACAAAGGAGTTGCTGAATCACAAGTGAAATGTAGTGGAGACATTGACAGCGATGTTGATAGATTGTTGGGGCTGTCAATACCAATAGATCAGTGGTTGAGACTGGATGCTGGTATTATTAAAGATCAAAATCCAGAGCAAAATTTGAAGATCCTTAAAGTTCATGATTCTAAAATCTCAGACTATGAAGGTGAAGGGTTGGAAAATGCTATGGACAGGTTTAGAGTAATATATGGTGGGAAGCACGGACTCCTGGGGGACCACCTCACAGTGGCTTTTGTAACGCAGCTCAGAGATCCCTTTCGGAATTATGAAGCAGTTGGAGTTCCAATGCTTGTTCTAACGCAAGTAGAAAGAGTTTACGTCCAAGCAATGCTGCAAGACCACAACATGGTGCTTGAAAcaagggagaagaaagaaatggaggATACAAGTGATATGGATAACGGCACTCATAAGTTCAGATTTAAAATGAGTGGAGTTCATCTTGCAGGCGTTGTTACCAAACCCGGACAGAGCCAACTTTGGGGTACTGCAACTCAAAAACAATCTGGGTTCCGTTGGTTGCTTGCCAGCGGCATGGGAAGTAGTGGGAACGTTAAACAttcatcttcaaaatcaaatgcaaTTGTAAGACCATCCTCCTTGTTGGCAAACAAGTTGCAGAGTGAGGACATCCTCTGGAGCATTTCTTCTCATGTTCATGTTACGGACACTAATGGGCTGGCAGCTCAAAATGCTCATATTCGGAACCCTGATATCTTATTTGCAAATTG 3350 0.4021 MASKSGHGDADDSGDFNNGKLLRDIEEISKALYLHKTPSKASLPPFDNRSKSAGKTRLSRAQFSSNQQFLREDLLPKYKKSSSPWNWKKPLKALTHIGHRKFNCCFNFHVHSIEGLPSNLNGVSLCVHWKRKNSILKTRPSRVFQGVAEFDETLMHTCSVYGSQSGSNHSAKYESKLFLIYASVVGVPQLDIGKHEVDLTRLLPLTLEELEGDRSSGKWTTSFRLTGKARGANLNVSFSFHVIKDDLMKLSGSVNALNLINLDQRMPSATGNDVNFSSSNTDMVLWRGGIVPNKLHDGSILPSHSEDMSTGHEVLLDYGSDSGSGLSKSIKLLYQKIDENFYDPAREDSEYVGPLDSPTLLNLEPDEESNQYEFDYPEFTIIEKGIETLEDDFLKFDGKTVQTVDMSAVETIGVDEIVKDNGISFVKNKICNSKNEIRINCMDGDILDDSKHKCNSSLIILPSIEELDSASITSDLVASNPSQPMNDSLAQEQYTNVKSNYKAHKMERRSHSLDDITESVASDFLNMLHMESSGSFGSSFDGDPQSPREQLLREFEKEAIASGNFIFDFDAKEGQLDFCCPDPLGSSSEDCPVDFNLSLIVQAAEEEHARASQSLINRRKAKILEDLETESLMLQWGLNDRDFRNSPRTCSGGFGSPIELPSEESSALPSIGPGLGSFIQTQGGGFLRSMSPSLFLSAKNGGKLIIQASNPVVLPAKMGNDIMEILLQVASAGVEELCDHIYRLMPLRDITGKSIQNMAWDGTTSTDAPERQDFVQQELFEEFGRDSDCIKNELKEFPYEVLGLDYVPLEDVAPMTIDKIEALFIEGLRIQSGMPSEEATSYIRPQYPKMFASGGRVADKGVAESQVKCSGDIDSDVDRLLGLSIPIDQWLRLDAGIIKDQNPEQNLKILKVHDSKISDYEGEGLENAMDRFRVIYGGKHGLLGDHLTVAFVTQLRDPFRNYEAVGVPMLVLTQVERVYVQAMLQDHNMVLETREKKEMEDTSDMDNGTHKFRFKMSGVHLAGVVTKPGQSQLWGTATQKQSGFRWLLASGMGSSGNVKHSSSKSNAIVRPSSLLANKLQSEDILWSISSHVHVTDTNGLAAQNAHIRNPDILFAN 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00533 1116 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 99 245 IPR019448 -
Bva10g00533 1116 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 2 1 1116 IPR039823 -
Bva10g00533 1116 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 1 1116 IPR039614 -
Bva10g00533 1116 MobiDBLite consensus disorder prediction 36 64 - -
Bva10g00533 1116 ProSiteProfiles C2 NT-type domain profile. 94 242 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00533 Bva-Chr10 4992119 4996343 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00533 - - gmx:102659940 1072.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00533 10 4992119 4996343 Bva10g00533 10 4992119 4996343 ECH