Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00531 ATGGCGCGTCGTACGAAGAATATGCCTTGGAGGCCTCCGTCTACAACAGGTTCAGAGAAAAATGATGAGAAGCGGCGAATGAGTGGAACGGAGAGGTCGGCTTATTTCGCAAGAAGAGAGGCAGCTAAGGTTTTGAAAATGGTTCTTCAGGGAGACGCAAACAGCCGAGCCGTTGCCTCCATCAAATCGCTTATTTACAGGCCTTCTATTAGAAACAAGAAGGGCACCTTTGCTCTCGTTTGTCAGACCCTTAAACATCTTCCTATAATCAAGGAAGTCTTGGAAGCTGCTTCTATACTCAACAGCAAGTGGAAGAGACAAGAGGAGTTGGTTTACGTTATTGTGTATGATATTCTTTTTGGCCAGGCAGTTTCACTGGTTGGTGATGCGGAGAAGTTCCTGGCACGCCGCAAAGACGCACTACGGTCAACCCTAAAACAGTTTTTGGCACAGAAAAAAGTGAAGACTCTTAAACAGTTGATTGCTCTATATGAAGTTCCTGATGTTTCTGTACCTCGTTACGTTCGTGTGAACACACTTAAACTGGATACAGATTCTGCCTTATGTGAACTGGGGAAGAAATACTCGgttgaaaaagataatttgcTGCCTGATCTGCTGATTCTCCCACCGGGCACTGATTTGCACGATCACCCTCTTGTCAAGAATGGAAGTATCTTTCTGCAAGGTAAGGCAAGTTCCATGGTGGCACCGGCCCTTGCCCCTGAGCCAGGATGGGAGGTTCTGGATGCATGTGCAGCTCCAGGAAACAAAACTGTCCACCTTGCGGCTTTTATgaagagaaagggaaggaTTATAGCATGTGAGCTGAATAAAGACAGGGTTAAACGTTTGAAAGAGACTATAAAGCTGTCTGGTGCTTCTAACATAGTAGTTCTTAATGAGGATTTCTTGAACATCGACCCCGAGACTCCTTCATATTCTAAGGTGCGCGCTATTCTCTTAGATCCTTCCTGCTCTGGTTCTGGTACCGCTGCTTCAAGACTAGACCATCTTCTCCCCTCTAAAGCCGCAGGCCAGGATACTGATATGGGACGATTGAACAAGCTCGCAACTTTTCAGAGAAAAGCTCTTCAGCATGCATTTTCTTTTCCAGCCGCTGAGAAGGTAGTTTATAGTACGTGTTCGATCAACCAAATTGAGAATGAAGACGTCGTCAAATCAGTTCTGCCGATAGCTGAATCCTATGGATTTCAACTTGTCACCCCCTTCCCCCAGTGGCAGCGCCGTGGCCTCCCAGTATTTGAAGGCTCCCAACATCTGCTTAGGACAGATCCTGCTGAGGATGGTGAGGGCTTCTTCATTGCTTTGTTTGTCAGAAAGGATGCAACCCATTCGGCCAAAACCAACAAGTTGCGAAGCAATAGATATCCGATGATGCCATTTCTTAACACTAACTTGTTCAATAATTGGTTGCGCTTCCAGTTGAATCGTCGGACCCGTGGTTCGCGATCATA 1478 0.4533 MARRTKNMPWRPPSTTGSEKNDEKRRMSGTERSAYFARREAAKVLKMVLQGDANSRAVASIKSLIYRPSIRNKKGTFALVCQTLKHLPIIKEVLEAASILNSKWKRQEELVYVIVYDILFGQAVSLVGDAEKFLARRKDALRSTLKQFLAQKKVKTLKQLIALYEVPDVSVPRYVRVNTLKLDTDSALCELGKKYSVEKDNLLPDLLILPPGTDLHDHPLVKNGSIFLQGKASSMVAPALAPEPGWEVLDACAAPGNKTVHLAAFMKRKGRIIACELNKDRVKRLKETIKLSGASNIVVLNEDFLNIDPETPSYSKVRAILLDPSCSGSGTAASRLDHLLPSKAAGQDTDMGRLNKLATFQRKALQHAFSFPAAEKVVYSTCSINQIENEDVVKSVLPIAESYGFQLVTPFPQWQRRGLPVFEGSQHLLRTDPAEDGEGFFIALFVRKDATHSAKTNKLRSNRYPMMPFLNTNLFNNWLRFQLNRRTRGSRS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00531 492 MobiDBLite consensus disorder prediction 1 31 - -
Bva10g00531 492 MobiDBLite consensus disorder prediction 17 31 - -
Bva10g00531 492 PRINTS RNA (C5-cytosine) methyltransferase signature 430 447 IPR023267 GO:0001510
Bva10g00531 492 PRINTS RNA (C5-cytosine) methyltransferase signature 318 330 IPR023267 GO:0001510
Bva10g00531 492 PRINTS RNA (C5-cytosine) methyltransferase signature 220 234 IPR023267 GO:0001510
Bva10g00531 492 PRINTS RNA (C5-cytosine) methyltransferase signature 249 259 IPR023267 GO:0001510
Bva10g00531 492 PRINTS RNA (C5-cytosine) methyltransferase signature 374 390 IPR023267 GO:0001510
Bva10g00531 492 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 1 454 IPR023267 GO:0001510
Bva10g00531 492 Pfam 16S rRNA methyltransferase RsmB/F 239 445 IPR001678 GO:0008168
Bva10g00531 492 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 172 448 IPR029063 -
Bva10g00531 492 CDD AdoMet_MTases 248 336 - -
Bva10g00531 492 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 163 448 IPR001678 GO:0008168
Bva10g00531 492 Gene3D Sun protein; domain 3 165 228 - -
Bva10g00531 492 PANTHER BNAA09G04380D PROTEIN 1 454 - -
Bva10g00531 492 Gene3D Vaccinia Virus protein VP39 229 455 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00531 Bva-Chr10 4983849 4988308 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00531 K15264 - gmx:100775620 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00531 10 4983849 4988308 Bva10g00531 10 4983849 4988308 ECH