Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00530 atgGATTTCAGGGTGCTAGGCTTTGATTCACCATTGCTCAACACTCTACAGCAAATGATGGACATTGCAGACGATAATGCGGACAAGTCTGTCAACGCTCCAACCCACACGTTTGTTCGCGATGCCAAAGCTATGGCTGCAACTCCGGCAGACGTGAAGGAGTATCCGAATACGTACGTGTTCATCATCGACATGCCTGGGTTGAAATCTGGGGATATCAAGGTTCAGGTGGAGGACGACAATGTGCTTCTGATAAGTGGCGAGAGGAAAAGGGacgaagagaaagaaggagcCAAATATGTGAGAATGGAGAGACGGGTGGGCAAATTTATGCGCAAGTTTGTGCTGCCTGAGAATGCCAACACGGATGCCATTTCTGCCGTTTGCCAAGACGGTGTGCTTACCGTCACTGTTGAGAAACTGCCTCCGCCTGAGCCCAAGAAACCCAAGTCCATTGAGGTTAAGGTCGCTTA 473 0.4757 MDFRVLGFDSPLLNTLQQMMDIADDNADKSVNAPTHTFVRDAKAMAATPADVKEYPNTYVFIIDMPGLKSGDIKVQVEDDNVLLISGERKRDEEKEGAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVEKLPPPEPKKPKSIEVKVA 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00530 157 Pfam Hsp20/alpha crystallin family 51 155 IPR002068 -
Bva10g00530 157 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 41 155 IPR002068 -
Bva10g00530 157 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 8 156 - -
Bva10g00530 157 SUPERFAMILY HSP20-like chaperones 27 149 IPR008978 -
Bva10g00530 157 Gene3D - 9 156 IPR008978 -
Bva10g00530 157 PANTHER 18.0 KDA CLASS II HEAT SHOCK PROTEIN 8 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00530 Bva-Chr10 4982952 4983686 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00530 K13993 - pvy:116117493 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00530 10 4982952 4983686 Bva10g00530 10 4982952 4983686 ECH