Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00520 ATGGGATTCTCAGACAGCGCGCTTAGTCAGTCATCAGCTGATGAGAAGGAGCGTGGACCAAGCAGCGATTCCCATCTTGCcgcagaaaaggaaatgaaagcgTGCACACTATCGTCACTGTTTAGCTCCAAGACTCTGAATCTCCACCACTCCAAATCTTTACTCCCTCGCTCTCTTCACACATCTAAACCCTTGTTCAACTCTTTCCCTCTTTTCACTCGCATCAATCAGAATCACGATCACAATTGCAACAGCATCATCCACAAGTTCCAAATCCACAGTGCCTCAACTCCATTAATGGCTTCCTCTTTCAACTCAGAAGGAGCCCGTTGCCCACCAGCCATTCCGTTGCCTACTCCCCCTGTCACCAAGTTCAATATTGGGCTCTGTCAATTATCAGTGACCCCCGATAAGGAAAGGAACATCGCGCATGCTCGGAAAGCCATTGAGGAGGCCGCTGGAAAGGGTGCCAAGCTTGTTCTCTTGCCGGAAATATGGAATAGTCCATATTCAAATGATAGTTTCCCTCTCTACGCTGAGGATATTGATGCTGGTGGCGATGCATCACCTTCAACTGCAATGCTGTCCGAAGTCTCTCGTCTCTTGAAGATCACTATAGTTGGTGGCTCTATACCGGAGCGTTCTGGTGATCGGTTGTACAACACTTGTTGTGTCTTTGGCACTGATGGAAAGCTAAAAGCCAAACACCGCAAGATTCACCTTTTTGATATAGACATCCCTGGGAAGATTACCTTTATAGAATCAAAAACTCTTACAGCCGGGGAGACTCCTACCATTGTGGATACAGAAGTTGGGCGCATTGGCATTGGCATCTGTTATGACATCCGCTTTCCAGAACTGGCAATGATATATGCTGCAAGAGGTGCTCACTTGCTCTGCTATCCTGGGGCATTTAATATGACAACTGGACCATTGCATTGGGAGTTGTTGCAGAGAGCAAGGGCCACAGATAATCAGTTATATGTGGCAACCTGTTCACCTGCACGAGATACTGTATCTGGTTATGTGGCTTGGGGCCACTCCACCCTCGTTGGACCTTTTGGAGAAGTGCTGGCAACTACAGAACATGAGGAGGCAATTATTATAGCGGAGATCGATTATTCAGTGCTAGAGAATAGGAGGACAAGCCTACCCTTTACAAAGCAACGGCGAGGTGATCTTTACCAGTTGGTGGATTTTCAGAGGCTGAATAGTTCCAACTG 1223 0.4652 MGFSDSALSQSSADEKERGPSSDSHLAAEKEMKACTLSSLFSSKTLNLHHSKSLLPRSLHTSKPLFNSFPLFTRINQNHDHNCNSIIHKFQIHSASTPLMASSFNSEGARCPPAIPLPTPPVTKFNIGLCQLSVTPDKERNIAHARKAIEEAAGKGAKLVLLPEIWNSPYSNDSFPLYAEDIDAGGDASPSTAMLSEVSRLLKITIVGGSIPERSGDRLYNTCCVFGTDGKLKAKHRKIHLFDIDIPGKITFIESKTLTAGETPTIVDTEVGRIGIGICYDIRFPELAMIYAARGAHLLCYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARDTVSGYVAWGHSTLVGPFGEVLATTEHEEAIIIAEIDYSVLENRRTSLPFTKQRRGDLYQLVDFQRLNSSN 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00520 407 Gene3D - 122 400 IPR036526 -
Bva10g00520 407 SUPERFAMILY Carbon-nitrogen hydrolase 122 390 IPR036526 -
Bva10g00520 407 MobiDBLite consensus disorder prediction 1 15 - -
Bva10g00520 407 PANTHER OMEGA-AMIDASE, CHLOROPLASTIC-LIKE 82 406 - -
Bva10g00520 407 Pfam Carbon-nitrogen hydrolase 127 378 IPR003010 GO:0006807
Bva10g00520 407 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 125 374 IPR003010 GO:0006807
Bva10g00520 407 PANTHER NITRILASE-RELATED 82 406 - -
Bva10g00520 407 ProSitePatterns Uncharacterized protein family UPF0012 signature. 275 295 IPR001110 -
Bva10g00520 407 MobiDBLite consensus disorder prediction 1 27 - -
Bva10g00520 407 CDD nit 127 391 IPR045254 GO:0016811
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00520 Bva-Chr10 4953491 4958401 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00520 K13566 - jre:109008778 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00520 10 4953491 4958401 Bva10g00520 10 4953491 4958401 ECH