Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00519 ATGTACGGGTTTGAGAAGACACTGAGGGAGGATAGATTCCCTCTCCAACATAAAAACCCATCTTTCTCCTCTAGCCTTCTCGATAAGATTTACCGTTCCATCGACGAAGGGGAGAAAAAGAGTGGTGATATGAAGTTTTGCAGGGAAACAGTGGGAAAGAAACAGAGCCGGAGCATTGGGAAATGTAACAGAGGCGTGGAAGAGGAAGACATCGGAACGGCGACTCTCCGCCGTGCTTGTTTGCTCGAGAAATGGATGGACAAGAAGGTAAACGAAAAGGTTGGGACTCAAGGGAGACTGCATCTGACAGAAATGGACAGAAAATTACGAGAGGATCATGATCATGACCAAGATGTTCTGTTCTTTAGTTCTACATCTACTTCTTCTGATTCTAGTTCTGGAGGGTTCTCGTCCTCTGACACAGAATCCTTGTACAGAGTGAGAACAAAGGCATCGTGTTTTGCGCCGCCGAGGCCTAAGCCGGTGAGGACGAGTGTGCCGGTGAGATCAGACAAGGCTGAGAAGAGACAGAGCAATCGGTTTTATGAACACAGGGAAGTGCATTTGTTCGATTCCAGCACAGAACGCATAGCCAATCACGAAGAAagtttaatcaaatcaaaatcgaGGGCTCTCAAGATTTACAATAATCTGAAGAAGGTGAAGCAACCCATTTCTCCCGGTGCTCGTCTcacaaacttcatcaattcTCTGTTCACTACAGGGCACACAAAGAAAACGAAGAGCGTATCCTCTGTTGGAGTCTTCGAAGATATAAACGCTGAGAGAAAATTGAAGTCAGGGCAAGCTTCAACGTGCTCATCAGTATCTTCATTTTCCCGGTCTTGTTTGAGCAAATCTTCGCCTTCTTCCAGAGAAAAGGCGCGCAATGGGGTCAAAAGAACAGTCCGTTTCTACCCAGTAAGCGTGATCGTCGATGAAGATAGTCGACCGTGTGGCCACAAATGCTTGTATCAAGAAGAGGACTCTAACCTAATGCCCATGTCGGTGCCAACCGCTTGGAAAATTGGCCGATCACCCACTAAGAAGAACGACCAAGAGCTCAAGTTCCCAATCATGGAGAAAACTAGGCCAGTGGAAGAAGCTGCCAGAGAATTCTTAAAAGAATACTATCGAAACCAGAGGAAGAGTGATTTGAGCTTGAAAAATCTTCCCATTAGTAGAAATATCgaggaggaggaggatgaagatgatgatgacgaTGCAGCAAGTTATGCAAGTTCGGATCTTTTCGAGCTTGATCACTTGGCTATAATAGGAAATGGTAGATATAGTGAAGAGCTTCCTGTGTACGAGACGACTCATGTTGGTATAAATTGCGCTATCGCTAATGGTCACATAGTATA 1367 0.4323 MYGFEKTLREDRFPLQHKNPSFSSSLLDKIYRSIDEGEKKSGDMKFCRETVGKKQSRSIGKCNRGVEEEDIGTATLRRACLLEKWMDKKVNEKVGTQGRLHLTEMDRKLREDHDHDQDVLFFSSTSTSSDSSSGGFSSSDTESLYRVRTKASCFAPPRPKPVRTSVPVRSDKAEKRQSNRFYEHREVHLFDSSTERIANHEESLIKSKSRALKIYNNLKKVKQPISPGARLTNFINSLFTTGHTKKTKSVSSVGVFEDINAERKLKSGQASTCSSVSSFSRSCLSKSSPSSREKARNGVKRTVRFYPVSVIVDEDSRPCGHKCLYQEEDSNLMPMSVPTAWKIGRSPTKKNDQELKFPIMEKTRPVEEAAREFLKEYYRNQRKSDLSLKNLPISRNIEEEEDEDDDDDAASYASSDLFELDHLAIIGNGRYSEELPVYETTHVGINCAIANGHIV 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00519 455 MobiDBLite consensus disorder prediction 155 176 - -
Bva10g00519 455 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 1 454 IPR039621 GO:0009734
Bva10g00519 455 PANTHER PROTEIN BIG GRAIN 1-LIKE B 1 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00519 Bva-Chr10 4943754 4945723 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00519 - - qsu:112008522 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00519 10 4943754 4945723 Bva10g00519 10 4943754 4945723 ECH
Bva10g00519 10 4943754 4945723 Bva06g02268 06 14757813 14759473 ECH
Bva06g00554 06 5882892 5884739 Bva10g00519 10 4943754 4945723 ECH
Bva05g01089 05 5594369 5595910 Bva10g00519 10 4943754 4945723 ECH