Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00510 ATGATAGCTTACCTGGAGCACTTCGTGCATGGAAATGACACAGAATCGAGACCGGATGACGACGTCATAGCCCTCTCCAAAAGGCTTGACCTCCAACTTAAAGGCACTTTTGACTGTACTGATACTCCCACCAGCATAGCCAGTAAGGATTTCGGCGGAATGAAATCTTTGAAACCGTTGGCCTTCATTGGACCCGCCGACGCCGACGACGTTGCTCGAGTAGTCAAAGCGGCTGCCACCTCGTCGAATCTGACAGTTGCGGCACGAGGCAACGGCCACTCCATTAACGGCCAGGCTATGGCCGATCAAGGTCTCGTCCTAAACATGCGAACCATGGAGGACCTTTTTCAGGTGACGTCAATAAATGGCTCGCCCTATGTTGACGTCTCGGGAGGGGCATTATGGGAAGACGTTCTCAGACGGTGCGTGCTGGGGTATGGTTTAGCCCCGAGGTCGTGGACAGATTATCTGAGTTTAACTGTGGGCGGAACGTTGTCCAACGCTGGCGTGAGTGGCCAAGCCTTCCGTTACGGTCCCCAAACGTCTAACGTAACGGAATTGGAGGTTGTAACTGGCAAAGGCGATACGATTGTTTGCTCCGAAAACCAAAATTCGGAGCTTTTCTTTGGGGTGCTGGGTGGTCTCGGTCAATTCGGTATTATCACCAGAGCTCGAGTTGTGCTGCAACCAGCTCCAGACAGGGTGAGGTGTATTAGACTTGTGTATTCAAAGTTCGAAGAATTTACCGAAGATGCTGAAGTTTTGGTGAGTCAGCAAGAGGGAGGTTTTAGCTACGTGGAAGGATTTGTGTTCGTCAACAATGACGACCCCGCCAATGGATGGCCTACCGTTCTATTAGACCCGGACCAAGAATTCGATCCGACACACATCCCTAACACCGCTGGCCCTGTCCTCTACTGCCTAGAACTCGCTCTTCATTATAGAAACACAGACCACGTTTCGGATGTTAACATGGATGTGGATAGATTGCTTGGAGGGCTACGATTCATTGAAGCTTTGAGGTTCGAGGTGGATGTGGAGTACATGGATTTCTTGCTACGTGTAAAGTGTGCGGAGGATGAAGGCAAGGCCAACGGCATCTGGGACGCACCTCATCCTTGGCTGAACCTCTTGGTGTCCAAGTCCAATATCCTTGAATTTGATCGTGTTGTGTTCAAGAAGATCCTTAACAACGGGGTTGGCGGGCCCATTCTGGTCTACCCTCTCTTGCGATCCAAGTGGGATAGTCGTACCTCGGTGGTGGTGCCAGAAAGTGAGATCTTCTACATAGTAGCGTTGCTCCGTTTTAATCCTGCAGCCCCAAAAGGGCCACCGGCCGAATTGTTGGTGGCACAAAACCAAGAGATCATCCAGTTCTGCTGCCACAGAGGCTTTGATTTCAAGCAATACCTTCCTCACTACCAGACGCAGGAAGACTGGAAACGACACTTTGGGAATCAATGGACCAGATTCGTCGAGAGAAAAGCCAATTTTGATCCTATGGCTATCCTTGCACCTggacagaaaattttctccagAATCCCTCAACCCTA 1553 0.499 MIAYLEHFVHGNDTESRPDDDVIALSKRLDLQLKGTFDCTDTPTSIASKDFGGMKSLKPLAFIGPADADDVARVVKAAATSSNLTVAARGNGHSINGQAMADQGLVLNMRTMEDLFQVTSINGSPYVDVSGGALWEDVLRRCVLGYGLAPRSWTDYLSLTVGGTLSNAGVSGQAFRYGPQTSNVTELEVVTGKGDTIVCSENQNSELFFGVLGGLGQFGIITRARVVLQPAPDRVRCIRLVYSKFEEFTEDAEVLVSQQEGGFSYVEGFVFVNNDDPANGWPTVLLDPDQEFDPTHIPNTAGPVLYCLELALHYRNTDHVSDVNMDVDRLLGGLRFIEALRFEVDVEYMDFLLRVKCAEDEGKANGIWDAPHPWLNLLVSKSNILEFDRVVFKKILNNGVGGPILVYPLLRSKWDSRTSVVVPESEIFYIVALLRFNPAAPKGPPAELLVAQNQEIIQFCCHRGFDFKQYLPHYQTQEDWKRHFGNQWTRFVERKANFDPMAILAPGQKIFSRIPQP 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00510 517 Gene3D - 235 470 IPR016170 -
Bva10g00510 517 Gene3D - 109 233 IPR016169 -
Bva10g00510 517 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 232 511 IPR015345 GO:0009690|GO:0019139|GO:0050660
Bva10g00510 517 Pfam FAD binding domain 59 200 IPR006094 GO:0050660
Bva10g00510 517 ProSiteProfiles PCMH-type FAD-binding domain profile. 55 231 IPR016166 GO:0071949
Bva10g00510 517 SUPERFAMILY FAD-binding/transporter-associated domain-like 39 230 IPR036318 GO:0050660
Bva10g00510 517 PANTHER GULONOLACTONE OXIDASE 11 516 - -
Bva10g00510 517 Gene3D - 47 512 IPR016167 -
Bva10g00510 517 SUPERFAMILY FAD-linked oxidases, C-terminal domain 232 511 IPR016164 GO:0003824|GO:0050660
Bva10g00510 517 PANTHER CYTOKININ DEHYDROGENASE 7 11 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00510 Bva-Chr10 4909164 4912712 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00510 K00279 - qsu:111997861 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00510 10 4909164 4912712 Bva10g00510 10 4909164 4912712 ECH