Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00509 ATGAAGATTTGGTGCTGCCTATGCTTCAACGAAGAAGACGAGGAGGATAATTATAATCGTCCAAAGTCTATGAAGGAGGAAGACATTTTTGGAAACCAAGACTTGCCTGCCGATACTTTTGAAAATGACGAAGACCCTCTTGTTGGCACTGCTGCACCTTTAAGTCTCGCCGCGATTGACCGCGAACACGACGAGCAATTGAGGTTGTTTGAGGAGATGGTCAGGGCTGTTCGGGTTGGTGCCTTTGCCTCTTGGTCTAACACCGGGCCTCGAACATCGCGCCGCTCTGAGGGAGAGAGTAGCTCCGCTTCGGCTAACCTAGCACCTGTTTTGGACAGTGGCGCCGAGGATAGCCGCGATTCTCACCACAAGCGTGCCAAAGTCCATTCTGATTTCGATGAGTGTCATTATGTGACACTAGCATCTTCAAATACTGGGAAATCCATTGCATATGCTGACTACAGAGATTATGATAACATCCCAGGCTCGTCTGTTCGATCCAATAATGGCACATGTTACGATGCTTTCACATTTATGGCTTCTGGTGAGGGGAATAACTTTGACTCTAGCTGTGTGAAAGAGAATGAAGCAAATGACAGCGACATTTCTAAATTGGAATATCTGGAGGTCAGGATGGATCTTACAGATGACTTGTTACATATGGTTTTCTCATTCTTGGACCATCCCAATCTCTGCAAAGCTGCTAGAGTTTGTAGGCAGTGGCGGGCTGCTAGTGCACATGAAGATTTTTGGAGgtgtttgaattttgaagatcGGAACATATCAATAGAGCAATTTGAGGACATGTGTAGGCGTTATCCTAATGCCACAGGAATGAATGTATCTGGTCCTGCTATTCACATACTTGTCATGAAGGCTATCTCTTCATTAAGGAATCTCGAGGTCTTATCCTTGGGAAGAGGGCAGATAGGGGATACATTTTTCCATGCTTTAGCTGATTGTTCCGTGTTGAAAAGATTGAACATCAATGATGCTACACTTGGCAATGGTATTCAGGAGATACCCATCAATCATGATAGATTGTGTCATCTTCAACTAACAAAATGCCGTGTAATGCGTATATCAGTCAGGTGTCCTCAACTCGAAACTATGTCCTTGAAGCGCAGTAACATGGCACAGGCTGTGCTCAATTGCCCTCTTCTGCATGAGCTTGACATAGGTTCCTGTCACAAACTTCCAGATGCTGCTATTCGCTCAGCTGCAACTTCATGCCCTCAATTACTGTCTCTGGATATGTCCAATTGTTCATGTGTTAGTGATGAAACACTACGTGAGATTTCTCTAAGTTGTGCTAACCTAAGTATTCTCGATGGGTCATACTGCCCAAATATATCGTTGGAGTCTGTTAGACTGCCAGTGTTGACGGTTCTCAAGCTTCACAGCTGTGAGGGAATCACTTCAGCCTCAATGGCTGCAATATCTAATAGTTATATGTTGGAGGTTTTGGAGCTTGATAATTGCAGCCTATTGACTTCTGTCTCATTGGATCTTCCACGGTTGCAGAATATTAGATTAGTACATTGTCGCAAATTTGCTGATTTGAACTTGAGGGCTATAATGCTATCTTCTATCTTGGTGTCTAATTGCCCTGCTCTCCACCGGATCAACATCACTTCAAATTCACTTCAGAAATTAGCATTACAAAAACAAGACAGCTTAACCTCATTAGCTCTGCAATGCCAATCTTTGCTAGAAGTGGACCTCACTGACTGTGAATCTTTGACAAACTCTATATGTGATGTTTTTAGTGATGGTGGAGGATGCCCAATGTTGAAATCACTAATTCTTGATAACTGCGAGAGTTTGACTTCAGTTCGATTCATCAGTACCTCTTTAGTCAgtctctctcttgttggttGCCGGGTAATCACTATTCTGGAGCTTACATGCCCTAATCTTGAGAAAGTTTGTTTGGATGGTTGTGACCACTTGGAAAGAGCATCATTTTGTCCTGTTGGTCTTCGGTCTCTAAATCTAGGAATATGTCCTAAACTGGATGTCCTCAGCGTCGAAGCACCTGCTATGGTCTCACTTGAGTTGAAAGGATGTGGTGTGCTATCTGAAGCATCTATTAATTGTCCTCTTTTAACTTCTCTGGATGCCTCTTTTTGCAGCCAACTTACAGATGACTGCTTGTCTGCAACAACTGCCTCGTGCCCGTTGATTGagtctttaattttaatgtcatGCCCATCAATTGGGTCAGATGGGCTTTGTTCTCTGCATTGGCTCCCTAATTTGACTTTTCTTGATTTATCATATACTTTCTTGATGAACTTGCTGCCTGTATTTGAGTCTTGTTCTCAATTAAAGGTATTGAAGTTACAAGCGTGCAAGTATCTCATTGACTCGTCTCTTGAGCCTCTCTACAAGGAAGGTGCTTTGCCAGCACTTCAGGAGTTGGACCTATCTTATGGAACTCTTTGTCAATCTGCCATTGAGGAACTTCTTGCTTGCTGCACGCACCTTACACATGTGAGCTTGAATGGCTGTGTGAATATGCACGATTTGAATTGGGGTTGCAATCATGGAACTGCGTTACCTGCTGTACGTCCTTCACGTGAGAATGCCCATGATGCTAGTGGGCAACCCAACCGTTTACTGCAAAACCTGAACTGCGTGGGATGTCCAAATGTTAGGAAAGTTCTCATCCCGTCAACAGCACGCTGTTTCCATTTGTTATTTCTAAACCTTTCATTGTCAGCGAATTTGAAGGAGGTTGATGTTTCTTGTCTCAACCTATGCTTTCTTAATTTAAGCAATTGTTCCtctttggaaattttgaagttagaGTGTCCAAGATTAACTAGTCTATTTCTTCAGTCTTGCAACATTGACGAGGAAGCTGTTGAAGCTGCCATATCAAAATGCAGTATGCTTGAGACTCTTGATGTTCGCTTTTGTCCAAAGGTAAGTCCGATAAGCATGGGAAGATTACGTGCGGCGTGTCCTAGTTTGAAGCGTATATTCAGCAGCTTGTCAACTTGTTG 3011 0.4234 MKIWCCLCFNEEDEEDNYNRPKSMKEEDIFGNQDLPADTFENDEDPLVGTAAPLSLAAIDREHDEQLRLFEEMVRAVRVGAFASWSNTGPRTSRRSEGESSSASANLAPVLDSGAEDSRDSHHKRAKVHSDFDECHYVTLASSNTGKSIAYADYRDYDNIPGSSVRSNNGTCYDAFTFMASGEGNNFDSSCVKENEANDSDISKLEYLEVRMDLTDDLLHMVFSFLDHPNLCKAARVCRQWRAASAHEDFWRCLNFEDRNISIEQFEDMCRRYPNATGMNVSGPAIHILVMKAISSLRNLEVLSLGRGQIGDTFFHALADCSVLKRLNINDATLGNGIQEIPINHDRLCHLQLTKCRVMRISVRCPQLETMSLKRSNMAQAVLNCPLLHELDIGSCHKLPDAAIRSAATSCPQLLSLDMSNCSCVSDETLREISLSCANLSILDGSYCPNISLESVRLPVLTVLKLHSCEGITSASMAAISNSYMLEVLELDNCSLLTSVSLDLPRLQNIRLVHCRKFADLNLRAIMLSSILVSNCPALHRINITSNSLQKLALQKQDSLTSLALQCQSLLEVDLTDCESLTNSICDVFSDGGGCPMLKSLILDNCESLTSVRFISTSLVSLSLVGCRVITILELTCPNLEKVCLDGCDHLERASFCPVGLRSLNLGICPKLDVLSVEAPAMVSLELKGCGVLSEASINCPLLTSLDASFCSQLTDDCLSATTASCPLIESLILMSCPSIGSDGLCSLHWLPNLTFLDLSYTFLMNLLPVFESCSQLKVLKLQACKYLIDSSLEPLYKEGALPALQELDLSYGTLCQSAIEELLACCTHLTHVSLNGCVNMHDLNWGCNHGTALPAVRPSRENAHDASGQPNRLLQNLNCVGCPNVRKVLIPSTARCFHLLFLNLSLSANLKEVDVSCLNLCFLNLSNCSSLEILKLECPRLTSLFLQSCNIDEEAVEAAISKCSMLETLDVRFCPKVSPISMGRLRAACPSLKRIFSSLSTC 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00509 1003 SUPERFAMILY F-box domain 213 244 IPR036047 GO:0005515
Bva10g00509 1003 SMART fbox_2 214 254 IPR001810 GO:0005515
Bva10g00509 1003 MobiDBLite consensus disorder prediction 87 108 - -
Bva10g00509 1003 PANTHER OS10G0396666 PROTEIN 116 964 IPR044703 GO:0010252|GO:1905393
Bva10g00509 1003 MobiDBLite consensus disorder prediction 87 125 - -
Bva10g00509 1003 Pfam F-box-like 216 255 IPR001810 GO:0005515
Bva10g00509 1003 Gene3D Ribonuclease Inhibitor 765 856 IPR032675 -
Bva10g00509 1003 Gene3D Ribonuclease Inhibitor 860 1003 IPR032675 -
Bva10g00509 1003 Gene3D Ribonuclease Inhibitor 457 627 IPR032675 -
Bva10g00509 1003 Gene3D Ribonuclease Inhibitor 210 456 IPR032675 -
Bva10g00509 1003 SUPERFAMILY RNI-like 235 500 - -
Bva10g00509 1003 PANTHER OS10G0396666 PROTEIN 116 964 - -
Bva10g00509 1003 SMART LRR_CC_2 827 860 IPR006553 -
Bva10g00509 1003 SMART LRR_CC_2 637 662 IPR006553 -
Bva10g00509 1003 SMART LRR_CC_2 385 410 IPR006553 -
Bva10g00509 1003 SMART LRR_CC_2 726 751 IPR006553 -
Bva10g00509 1003 SMART LRR_CC_2 964 989 IPR006553 -
Bva10g00509 1003 SMART LRR_CC_2 458 483 IPR006553 -
Bva10g00509 1003 SMART LRR_CC_2 504 529 IPR006553 -
Bva10g00509 1003 SMART LRR_CC_2 595 625 IPR006553 -
Bva10g00509 1003 SMART LRR_CC_2 411 436 IPR006553 -
Bva10g00509 1003 SMART LRR_CC_2 939 963 IPR006553 -
Bva10g00509 1003 SMART LRR_CC_2 700 725 IPR006553 -
Bva10g00509 1003 ProSiteProfiles F-box domain profile. 208 254 IPR001810 GO:0005515
Bva10g00509 1003 Gene3D Ribonuclease Inhibitor 670 764 IPR032675 -
Bva10g00509 1003 SUPERFAMILY RNI-like 439 688 - -
Bva10g00509 1003 SUPERFAMILY RNI-like 662 998 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00509 Bva-Chr10 4898551 4906241 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00509 - - gmx:100782842 1505.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00509 10 4898551 4906241 Bva10g00509 10 4898551 4906241 ECH