Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00499 ATGGGTATTATTGAAAGagcatcatcttcatcttcgtCTTCTGCCATTTTTCTGATATGGCTCACTACGTTTCAAGGATACTTGATGCTCGTGAATGGTCATTTGAATTATAGGGAAGCTCTCACCAAGTCGATTATCTTCCTAGAGGCACAACGATCAGGAAAACTCCCAAGCAATAACAGGGTGCCCTGGAGAGGAGACTCTGCACTCGATGATGGAAAACTTGATGATGTGGACCTTGTCGGTGGATATTATGATGCAGGGGACAATGTCAAGTATGGGCTTCCCATGGCCTTCACAATCACTACTCTATCATGGGCTGCCATATTTTACGAGTCAGAATTGCGAGCCACCAACGAATTGGGGCATGCTCATGATGCCATTAGATGGGGGactgattattttataaaagctaCTTCTCGACGTAAACGATTATATGTTCAGgtTGGCGACCCAGAAGAAGATCACCAATGTTGGATTCGACCAGAAAACATGAAGACAAAAAGAAGTGTTTTGAAGATTGACAGTAACTCACCCGGGACAGAGATAGCTGCTGAAACTTCAGCAGCAATGGCTTCTTCTGCAATTGTTTTCAGACGCATAGATCGTCTTTATTCTCGTCGTCTCCTCAACAAAGCAAAAAGGcTTTTCAACTTTGCAAAATTGCACCAAGGAACTTATGACGGAGAATGTCCCTTCTACTGTTCCTGGTCTGGCTACAACGACGAGATGTTGTGGGCAGCCACATGGCTATACTTAGCTACCAGAAAGTCAATCTACCTGAACTACATTACAGAAAAATCTATTAGTGCTAGCGTGACTGAGTTTAGTTGGGACCTTAAATATGCTGGAGCTCAAATCCTTCTCTCTCAGTTACATTTTCAAGGAATACACGACCTGGAAACATTCAAAAGCCATGCTGATGGTTTTGTATGCTCTGTACTTCCAGATAGTCCCTACCACCAGATCAACATCTCCCCGGGTGGGTTAGTTCATTTAAGAGATGGAGCCAACATGCAATATGTTACCGCCACTGCTTTGTTGCTTAGCGTCTACAGTGATTTGCTTTTCCGATACAAACAGACAGTGACTTGTGGATATAAACAATTCAGTTCAATTCACCTCTTCGATTTTGCTAAAAAACAAATGGATTACATATTAGGGAAAAACCCAGAAGATAGATCTTACATGGTTGGATTTGGGAAGAACCCACCAACGCAAGCTCATCATAGAGGCGCTTCCGTGCCAAAGTTGCCCGGAGATGCAAAAGTGAACTGCGGCATGAGCTTCGTGTACTGGTATAACAAGGATGAACCAAATCCGAATGAGTTAACTGGTGCCATAGTTGGTGGACCCGACCGCAATGACAAATTCGTCGATAAACGTTGGAATTCATCCTACACTGAACCTTGCACCTACGTTAACTCCCTAGCAGTTGGTCCTCTAGCAAAGCTTGCTTCTTTGcatggtta 1472 0.4232 MGIIERASSSSSSSAIFLIWLTTFQGYLMLVNGHLNYREALTKSIIFLEAQRSGKLPSNNRVPWRGDSALDDGKLDDVDLVGGYYDAGDNVKYGLPMAFTITTLSWAAIFYESELRATNELGHAHDAIRWGTDYFIKATSRRKRLYVQVGDPEEDHQCWIRPENMKTKRSVLKIDSNSPGTEIAAETSAAMASSAIVFRRIDRLYSRRLLNKAKRLFNFAKLHQGTYDGECPFYCSWSGYNDEMLWAATWLYLATRKSIYLNYITEKSISASVTEFSWDLKYAGAQILLSQLHFQGIHDLETFKSHADGFVCSVLPDSPYHQINISPGGLVHLRDGANMQYVTATALLLSVYSDLLFRYKQTVTCGYKQFSSIHLFDFAKKQMDYILGKNPEDRSYMVGFGKNPPTQAHHRGASVPKLPGDAKVNCGMSFVYWYNKDEPNPNELTGAIVGGPDRNDKFVDKRWNSSYTEPCTYVNSLAVGPLAKLASLHG 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00499 490 PANTHER ENDOGLUCANASE 16-RELATED 13 486 - -
Bva10g00499 490 PANTHER ENDO-1,4-BETA-GLUCANASE 13 486 - -
Bva10g00499 490 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 385 411 IPR018221 -
Bva10g00499 490 Gene3D - 32 490 IPR012341 GO:0005975
Bva10g00499 490 Pfam Glycosyl hydrolase family 9 37 480 IPR001701 GO:0004553|GO:0005975
Bva10g00499 490 SUPERFAMILY Six-hairpin glycosidases 36 488 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00499 Bva-Chr10 4845145 4847553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00499 28 487 Glycoside Hydrolase AT3G43860 69.848 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00499 K01179 - gmx:100811509 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00499 10 4845145 4847553 Bva10g00499 10 4845145 4847553 ECH