Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00498 ATGGATTCAGACGGAGTTTCTCCTGACATCTTTTCTTTGGAGTCCTTTGTATTCCAAAATTTTGGGTATCATTTATTTTCGCAAGTGAGTTCATTGGTGGACAGTTATGTTTACCACTCTAGAAACGTATATGTCCCTGGAACCTTAGCTCTTCAAGAGGCACTTAACCATGTATCAAGATTTGCTGGTTCTTTTCTGATTTCATTCTGTAGTGGACCCAGTTCAAATATTGCTCATGATGTAGCAAGTTCTTTGCATGGTCCTCAGTTTGGAAGCTCTAGCGCTTCTATTCAGGTTAAGCAGATATCTTTGGCTAGGCATATTCTGGCTGGATTTGGCTTCAGTTTTAGGTCTAAAGGGAAATCTCTAGCCCCCACGGTTCTGCGTAAGATTTCAAGTTTCACAATGAAACTGCTCCGGCAGGAAGCCAAAAGGCTTCAGTCATATCCTGTGTTCTATCTAGCTGCTGCACTGGTACCCCCTATTCAAAACTTATCTTCAAAGGTACTAGCTACTCCAGTGTCTCATTCTGATGTGCAAATGCACGGAGGCATGGACCAAATTCCTTGTGAGGTTGAACGCCAAAGATGTGCCTGCCTATCTTTTCCTGAATCAAACCGGACAAAACATGCAGTTGAGCCTAAAACTGGCATTGAATTTCCTATGGTTTTGGACAATGTATTAGCTGCAGAGAAGAATTCCATCTTTAACTCTGAGGTCCTGGTTGGAACAGGTTCCAGAACTATGACCATTGTTAAAATCAAGTCTTTGAAGGTCTATGCTTTTGGTTTTTATGTGCATCCTGACTCACTCTGTAAGAAACTGGGTCCAAAATATGCATCGCTTTCTGCTGATGAACTAAATAACTGCTGTGATTTCTACCAGGATCTTCTCAGGGAGGATATCACTATGACTGTCAGGCTAGTAGTGAATATCCGGGGAATGAAAATCAACTCTGTGAGAGATGCTTTTGAGAAATCACTACGAGCTCGATTAGTTAAGACGAATCCAACCACAGATTTTCAGTGCCTAAAAACGTTTGGTTCATGTTTCACAGAAGATATTCCATTACCTTTGggaacaataattaattttcgaCGAACAGCTGATGGCCAACTGATAACTGAAATTGGTGGCAATCAGATTGGAAGTGTCCACAGCAAAGATTTGTGTAGGGCTTTCTTTGACATGTATATTGGAGATGTCCCCGTGTGCGagcaaacaaaagaagagataGGCAGGAACGTCGCAAATATCATGGGGAGGTGCTG 1271 0.4091 MDSDGVSPDIFSLESFVFQNFGYHLFSQVSSLVDSYVYHSRNVYVPGTLALQEALNHVSRFAGSFLISFCSGPSSNIAHDVASSLHGPQFGSSSASIQVKQISLARHILAGFGFSFRSKGKSLAPTVLRKISSFTMKLLRQEAKRLQSYPVFYLAAALVPPIQNLSSKVLATPVSHSDVQMHGGMDQIPCEVERQRCACLSFPESNRTKHAVEPKTGIEFPMVLDNVLAAEKNSIFNSEVLVGTGSRTMTIVKIKSLKVYAFGFYVHPDSLCKKLGPKYASLSADELNNCCDFYQDLLREDITMTVRLVVNIRGMKINSVRDAFEKSLRARLVKTNPTTDFQCLKTFGSCFTEDIPLPLGTIINFRRTADGQLITEIGGNQIGSVHSKDLCRAFFDMYIGDVPVCEQTKEEIGRNVANIMGRC 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00498 423 Gene3D - 270 413 IPR016089 -
Bva10g00498 423 Pfam Chalcone isomerase like 240 412 IPR016087 GO:0016872
Bva10g00498 423 PANTHER FATTY-ACID-BINDING PROTEIN 2 1 423 - -
Bva10g00498 423 PANTHER FATTY-ACID-BINDING PROTEIN 2 1 423 - -
Bva10g00498 423 SUPERFAMILY Chalcone isomerase 212 421 IPR036298 GO:0016872
Bva10g00498 423 Gene3D - 212 398 IPR016088 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00498 Bva-Chr10 4839627 4843427 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00498 - - qsu:112026241 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00498 10 4839627 4843427 Bva10g00498 10 4839627 4843427 ECH