Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00489 ATGAGCTTATCCAAGAAAGGATCCCAAATGGATGGAAAACTAAGCTCTCCAAACAAGGCAACCACAACATTGAATCCAAATGCGGCAGAGTTCATTCCTTTTTCCCTCAGATCACCTTCAAGTGGAAGTACCAGCGCAGCAGATGCAAAAGCAAGGTTTTCTGCTGCTGGAGCTCTTGGGAAAGCAGTTTTAGATCGATCAGAGTCATCCATTTCCAATAATTCTGATGATGAGGCTCACCAATACTGGCGTTGTCAGCTCCCTGATGATATCACCCCTGACTTCAAGGTCATGGGAGAAGATGAGTCCCAAGGTCTTAACAATCTCTCTTTAGCGGGCTTGTCCTTGCATGACGAACATGATGCTTCAAGATTTCCTTCTTCTAAAGGAAGTAGATATATATCAAATGAGCAGCAGGAGTTATCTCAACAGCACTATAACGGAAATAGCTTTGCTGATAAATTAAGGTTTTCCACATCAACCTATAGGGAGGACCCATCTTCAGCAAGCTTTCTGCACATGATGACAAAACCTTGGGATGGACAAATTGGAAATAGCAAGGATTATGTTAATAGTGGTCAAGATGGGCTTCCTTATGATGACAACTCTAGACACGTGTTCTTAAATGACGTGATGGGTGAGCAAACAATTTTGGATGATGCTGATATGAACCCTTTGGAGTTTTTGGCTTCTCAATTCCCTGGTTTTGCTGCTGAAAGCCTGGCAGAAGTTTACTTTGCCAATGGATGTGACTTAAATCTGACCATTGAGATGCTCACTCAGTTAGAGCTTCAAGTTGATGGTAGTTTTAATCAGAATTTGAATGCAAAGACTCTTTCAGCTCCCAATCTTAGTGCGATGGACTTTCCTGCACTTACTGCACCTGATGGCCATACTACTTCAGTTAAATATGCTGGAGATAGTGTCCAACAAAGTGGCTATCCCTACCGTTCATCTGACAAGGAAAACATGctctttttcaattcaaactCTACGATTCCATCTAGAGGTGCTGTTGACTTTGCATCAGCTGTCAGGAAATTGGCTTCCCAGGATTCTGGCATATGGAAGTATGATAAAAATGGTTCTGGTAATGCTGCCATTGGCTCTAGCAGAAGTTCTCATGTTCTGGCTAGTGCCTCTAATGGCGGACAGGGGAGAGCCAACCTTGGTGATAGATTGCAGAATGGGGGTTCATCTCGGGCTGTTCCTGTTTGGCTTGAAACGGGTGATGCAGTTGCAAATATGTATTCTGAACTGCGAGAGGAGGCTCGTGATCATGCACGCATACGCAATGCATATTTTGAGCAGGCACGACAAGCATACCTTATAGGGAATAAGGCCTTAGCAAAGGAACTGAGTGTTAAAGGGCAACTGCACAACATGCATATGAAAGCTGCTCATGGAAAAGCACAAGAATCTATTTACCGCCAGAGGAATCCAGTTGCTCCTGAGACGCTGCAGGGCAACGGAAGAGGACACGAGAGGATGATAGATCTACATGGGCTGCATGTAACCGAAGCCATTCATGTGCTGAAACATGAATTGAGTACGCTGAGAAGCACTGCCAGAGCAGCTGAGCAGCGTTTGCAGGTTTATATATGTGTGGGTACGGGTCACCATACCAGGGGCTCCCGCACGCCTGCAAGACTTCCGATAGCTGTACAGCGATACCTGCTTGAAGAAGAGGGTCTTGACTACACAGAACCGCAGCCAGGCCTTCTTCGTGTTGTGATATATTG 1742 0.4472 MSLSKKGSQMDGKLSSPNKATTTLNPNAAEFIPFSLRSPSSGSTSAADAKARFSAAGALGKAVLDRSESSISNNSDDEAHQYWRCQLPDDITPDFKVMGEDESQGLNNLSLAGLSLHDEHDASRFPSSKGSRYISNEQQELSQQHYNGNSFADKLRFSTSTYREDPSSASFLHMMTKPWDGQIGNSKDYVNSGQDGLPYDDNSRHVFLNDVMGEQTILDDADMNPLEFLASQFPGFAAESLAEVYFANGCDLNLTIEMLTQLELQVDGSFNQNLNAKTLSAPNLSAMDFPALTAPDGHTTSVKYAGDSVQQSGYPYRSSDKENMLFFNSNSTIPSRGAVDFASAVRKLASQDSGIWKYDKNGSGNAAIGSSRSSHVLASASNGGQGRANLGDRLQNGGSSRAVPVWLETGDAVANMYSELREEARDHARIRNAYFEQARQAYLIGNKALAKELSVKGQLHNMHMKAAHGKAQESIYRQRNPVAPETLQGNGRGHERMIDLHGLHVTEAIHVLKHELSTLRSTARAAEQRLQVYICVGTGHHTRGSRTPARLPIAVQRYLLEEEGLDYTEPQPGLLRVVIY 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00489 580 Gene3D - 464 579 IPR036063 -
Bva10g00489 580 CDD CUE_CID7_like 224 265 IPR041806 -
Bva10g00489 580 MobiDBLite consensus disorder prediction 1 26 - -
Bva10g00489 580 Pfam Smr domain 498 566 IPR002625 -
Bva10g00489 580 SUPERFAMILY SMR domain-like 496 578 IPR036063 -
Bva10g00489 580 ProSiteProfiles Smr domain profile. 498 580 IPR002625 -
Bva10g00489 580 Pfam Domain of unknown function (DUF1771) 417 480 IPR013899 -
Bva10g00489 580 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 580 - -
Bva10g00489 580 SMART DUF1771_2 416 481 IPR013899 -
Bva10g00489 580 Coils Coil 509 529 - -
Bva10g00489 580 SMART SMR_2 495 580 IPR002625 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00489 Bva-Chr10 4808039 4812830 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00489 - - gmx:100796128 904.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00489 10 4808039 4812830 Bva10g00489 10 4808039 4812830 ECH