Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00482 ATGGCTAGTGAACGTGATCTTTTCTCCACGGAGATTGTGAACCGTGGGATTGAATCATCTGGACCCAACGCTGGCTCCTTGACCTTCTCCGTGAGGGTGAGGAGGCGGCTACCGGACTTTCTTCAATCAGTGAACCTTAAGTACGTCAAGTTGGGTTACCACTATCTGATAAACCATGGCATTTACTTGTTCACCATCCCTGTGCTTCTGCTAGTCTTCAGCGCTGAGGTGGGTAGCCTTAGCAAGGAAGAGCTATGGAAGAAGCTCTGGGAAGATGCCCGCTACGATCTTGCCACTGTCCTTGCTTTCTTTGGCGTTTTTGTTTTCACCCTCTCTGTCTACTTCATGTCTAGGCCACGTCCCATTTACCTTATTGATTTTGCATGTTATAAACCCAGCGATGACCTCAAGGTGTCAAGAGAGCAGTTCATAGAACTAGCAAGAAAATCAGGCAAGTTTGATGAGGGAAGCCTTGAGTTCCAGAGGAGGATACTGATGTCCTCAGGCATAGGGGACGAGACTTACATCCCAAAGGCAGTGATTGCCTCGAGTGAAAACTGCGCAACAATGAAAGAAGGGCGTGCAGAGGCATCCATGGTTATGTTTGGAGCACTTGATGAGCTGTTTGAGAAAACCCGAGTTCGTCCCAAGGATGTGGGTGTTCTAGTGGTGAATTGCAGCATTTTCAACCCAACACCTTCACTGTCAGCTATGATCATAAACCACTACAAGATGAGGGGAAACATATTGAGCTATAACCTTGGAGGAATGGGTTGCAGTGCTGGGATTATAGCCGTAGACTTGGCCAGAGACGTGCTTCAATCTAACCCCAATAACTATGCGGTGGTGGTAAGCACTGAGATGGTGGGATTTAACTGGTACCAGGGCAAAGAAAGGTCTATGTTGATACCAAACTGTTTCTTTCGCATGGGATGCTCTGCTCTTCTCATCTCCAACCGTCGTCGTGACTATAGCCGCGCCAAGTATCGCCTTGAACATATTGTTCGCACACATAAAGGTGCCGATGACCGGAGCTTCAGGTGTGTGTACCAAGAGGAAGATGAACAACGACTCAAGGGACTAAAGGTGAGCAAAGACCTCATTGAAATTGGTGGTGATGCTCTCAAAGCCAACATCACCACACTAGGGCCTCTGGTACTGCCCTTTTCTGAACAGCTCCTCTTCCTTGCCACGTTGGTGGGGAGGTACTTATCTGGTGGGAAATCTGCTGGAAATAATGCATCATCATCAAAGAAACCATACATTCCTGACTACAAACTTGCCTTTGAGCATTTCTGTGTGCACGCTGCGAGCAAGACCATTCTCGATGAGCTGCAGAGGAACCTGGAATTGAGTGAGAAGAACATGGAAGCCTCTACAATGACACTGCACCGCTTTGGCAACACCTCTAGCAGCAGCATCTGGTATGAGCTGTCTTACTTGGAAGCAAAGGAGAGGGTGAGAAGAGGGGACCGTGTTTGGCAACTGGCTTTTGGGTCTGGCTTCAAGTGTAACAGTGTAGTTTGGCGTTCCATGCGCAGACAGAAGAAGCCTTCTAGGAACCCTTGGCTTGACTGCATCGACAGATATCCTGTTTCTCTTACTCAATCTACTTG 1616 0.4808 MASERDLFSTEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHGIYLFTIPVLLLVFSAEVGSLSKEELWKKLWEDARYDLATVLAFFGVFVFTLSVYFMSRPRPIYLIDFACYKPSDDLKVSREQFIELARKSGKFDEGSLEFQRRILMSSGIGDETYIPKAVIASSENCATMKEGRAEASMVMFGALDELFEKTRVRPKDVGVLVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIAVDLARDVLQSNPNNYAVVVSTEMVGFNWYQGKERSMLIPNCFFRMGCSALLISNRRRDYSRAKYRLEHIVRTHKGADDRSFRCVYQEEDEQRLKGLKVSKDLIEIGGDALKANITTLGPLVLPFSEQLLFLATLVGRYLSGGKSAGNNASSSKKPYIPDYKLAFEHFCVHAASKTILDELQRNLELSEKNMEASTMTLHRFGNTSSSSIWYELSYLEAKERVRRGDRVWQLAFGSGFKCNSVVWRSMRRQKKPSRNPWLDCIDRYPVSLTQST 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00482 538 SUPERFAMILY Thiolase-like 332 511 IPR016039 GO:0016746
Bva10g00482 538 PANTHER 3-KETOACYL-COA SYNTHASE 4 532 IPR012392 GO:0006633|GO:0016020|GO:0016747
Bva10g00482 538 Gene3D - 131 512 IPR016039 GO:0016746
Bva10g00482 538 SUPERFAMILY Thiolase-like 108 326 IPR016039 GO:0016746
Bva10g00482 538 CDD CHS_like 98 509 - -
Bva10g00482 538 PANTHER 3-KETOACYL-COA SYNTHASE 10 4 532 - -
Bva10g00482 538 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 430 510 IPR013747 -
Bva10g00482 538 Coils Coil 435 462 - -
Bva10g00482 538 Pfam FAE1/Type III polyketide synthase-like protein 114 402 IPR013601 GO:0006633|GO:0016020|GO:0016747
Bva10g00482 538 PIRSF Very_long_ch_3-ktacl-CoA_syn 39 538 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00482 Bva-Chr10 4773750 4778846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00482 2 534 Miscellaneous Gene Families AT2G26250 77.314 0.0 890
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00482 K15397 - gmx:100818799 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00482 10 4773750 4778846 Bva10g00482 10 4773750 4778846 ECH