Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00460 ATGCATCACCCGTCGACTGTTAAGCCAGAACCTAGTGTGGTACTTGATTTCGTATCACAATTTGGTCGCTTTGCATTTAATCCAAAGTTTCTCAACTTGGGTTCAGATCGGTgtccttcaaatttatcagattttttgttctttgataGCGTAGGGGGTAAAATTGGTAGAAATAAGGGCAGGGCGGCTACTTCATTGAGTTTAGGAGGTGCAGGGAGTTTCTGTTTTCGGAAATTTTACAGTGACTTCAACAGAGTTGTCAGGTTTCATTGTGAGAGATTCCCAATTGGTTTTGCTTCACTTGGGATTGGTTCGGGGGATAATAATAGTGGCCTGAGAGAAAACGGGTCGCTGGGGGTTCTGGAAGGTGATAGATTGCCATTAAATGGAGTTGAGCCCGAGAACCCGAAAAAGGTTCTAATTTTGATGAGTGACACCGGTGGTGGTCATCGAGCTTCCGCAGAAGCCATCAAGGCGGCTTTTTACCAAGAATACGGTGATGATTACCAGGTGTTTATTACTGATTTATGGTCTGATCATACGCCTTGGCCATTCAATCAACTTCCCAGGAGCTATAGCTTTTTGGTTAAACATGGGCCATTGTGGAAAATGGCGTACTATGGGACTGCCCCGCGtgtagtacatcaatctaattTTGCTGCAACTTCAGCATTCATAGCTCGCGAGGTTGCCAAAGGGTTAATGAAATATCAGCCAGATATAATAATCAGTGTCCATCCGCTGATGCAGCATGTTCCACTTCGTATTTTAAGGTCGAAGGGTCTTTTGAAAAAGATTGTTTTTACCACAGTTGTTACAGATTTGAGCACCTGCCATCCTACGTGGTTTCATAAGCTTGTAACAAGATGCTATTGTCCAACAACGGATGTTTCAAAAAGGGCACTGAAAGCTGGACTTAAGCCATCCCAAATAAAGATTTATGGTCTACCTGTTCGACCTTCCTTTGTTAAGCCTGTTCGACCAAAGGATGAACTAAGGAGAGAATTAGGAATGGATGAGGATCTGCCTGCTGTATTGCTGATGGGGGGAGGAGAAGGTATGGGCCCTATTGAGGCTACTGCTCGGGCACTTGGAGATGCATTATACGATAAAAATCTTGGGGCTCCATTAGGTCAAATCCTTTTGATTTGTGGTCGCAATAAGAAACTTAGTAACAAATTGCTTTCAATTAAATGGAAGATTCCTGTGCAGGTAAAAGGGTTTGtcaccaaaatggaagaatgcATGGGAGCTTGTGATTGCATCATTACAAAGGCGGGTCCAGGGACAATTGCAGAGGCCATGATCCGAGGCCTCCCTATCATTTTGAATGATTACATTGCTGGGCAGGAAGCTGGAAATGTTCCTTATGTTGTAGAAAATGGAATTGGGAAGTTCTCTAAGTCGCCAAAGAGGATAGCCAAAATTGTTGCTGAGTGGTTTGGTCCAAAGGCTTACGAGCTAAAGGCAATGTCACAAAATGCAGTAAGGCTAGCAAAACCGGATGCCGTATTCAAGATTGTTCATGACCTTCACGAGCTTGTTAGACAAAGGAGTTTCCTACCAGAGTACTCATGTACAGCTTA 1586 0.4199 MHHPSTVKPEPSVVLDFVSQFGRFAFNPKFLNLGSDRCPSNLSDFLFFDSVGGKIGRNKGRAATSLSLGGAGSFCFRKFYSDFNRVVRFHCERFPIGFASLGIGSGDNNSGLRENGSLGVLEGDRLPLNGVEPENPKKVLILMSDTGGGHRASAEAIKAAFYQEYGDDYQVFITDLWSDHTPWPFNQLPRSYSFLVKHGPLWKMAYYGTAPRVVHQSNFAATSAFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRSKGLLKKIVFTTVVTDLSTCHPTWFHKLVTRCYCPTTDVSKRALKAGLKPSQIKIYGLPVRPSFVKPVRPKDELRRELGMDEDLPAVLLMGGGEGMGPIEATARALGDALYDKNLGAPLGQILLICGRNKKLSNKLLSIKWKIPVQVKGFVTKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYVVENGIGKFSKSPKRIAKIVAEWFGPKAYELKAMSQNAVRLAKPDAVFKIVHDLHELVRQRSFLPEYSCTA 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00460 528 Gene3D Glycogen Phosphorylase B; 328 499 - -
Bva10g00460 528 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 1, CHLOROPLASTIC 91 518 - -
Bva10g00460 528 Pfam Glycosyltransferase family 28 C-terminal domain 378 443 IPR007235 GO:0016758
Bva10g00460 528 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 137 514 - -
Bva10g00460 528 CDD GT28_Beta-DGS-like 139 516 - -
Bva10g00460 528 Pfam Monogalactosyldiacylglycerol (MGDG) synthase 150 318 IPR009695 GO:0009247|GO:0016758
Bva10g00460 528 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 91 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00460 Bva-Chr10 4665339 4669310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00460 1 528 Glycosyltransferase AT4G31780 69.821 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00460 K03715 - zju:107419930 870.152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00460 10 4665339 4669310 Bva10g00460 10 4665339 4669310 ECH