Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00453 ATGGCTTCCATGGCTTTCTCTACGACCTTCTACACTCCTCTGTATGATTTGACCCAAGCCAAAGCGAAAGCGAATTCTTCACCCACTCGGCCATCTATGGCTTTCACCGTCCCACCCATCAAAACATCATTTGGTTCCTCGAAGTCTGCCTTCTCACAACATGGTTTCCCTCAAAATTCATCCATGTTTCCAGGTTTTCCTTTAAAGTCTCGATCTTTCGGTGTTTATGCTAGAGCAGCCACTGAGAAaactatatatgattttactgTCAAGGATATTGATGGGAAGGATGTTTCTCTCAGCAAATTCAAGGGAAGGGTTCTTTTAATCGTTAATGTTGCTTCAAAATGTGGTCTGACGTTATCGAACTACTCAGAACTGTCGCAcgtatatgaaaaatataaaactgaaGGATTTGAGATACTAGCTTTCCCCTGCAATCAGTTTGGAGGGCAAGAGCCTGGTTCAAACCCAGAAATTAAGCAGTTTGCTTGCACTCGGTTTAAAGCAGAATATCCAATTTTTGATAAGGTTGATGTGAATGGACCAAATACAGCTCCAGTGTACCAGTTCCTGAAGTCCAGTGCGGGAGGTTTCCTTGGTGATCTTGTGAAGTGGAACTTCGAGAAGTTCTTGGTTGATAGAAATGGCAAAGCTGTTGAAAGATACCCACCGACAACCTCACCTTTCCAAATCGAGAAGGATATTCAGAGGTTACTTGCAGCGTG 728 0.4148 MASMAFSTTFYTPLYDLTQAKAKANSSPTRPSMAFTVPPIKTSFGSSKSAFSQHGFPQNSSMFPGFPLKSRSFGVYARAATEKTIYDFTVKDIDGKDVSLSKFKGRVLLIVNVASKCGLTLSNYSELSHVYEKYKTEGFEILAFPCNQFGGQEPGSNPEIKQFACTRFKAEYPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDRNGKAVERYPPTTSPFQIEKDIQRLLAA 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00453 242 ProSiteProfiles Thioredoxin domain profile. 79 241 IPR013766 -
Bva10g00453 242 PANTHER PHOSPHOLIPID HYDROPEROXIDE GLUTATHIONE PEROXIDASE 1, CHLOROPLASTIC 9 242 - -
Bva10g00453 242 Gene3D Glutaredoxin 76 241 - -
Bva10g00453 242 Pfam Glutathione peroxidase 85 193 IPR000889 GO:0004602|GO:0006979
Bva10g00453 242 CDD GSH_Peroxidase 84 236 IPR000889 GO:0004602|GO:0006979
Bva10g00453 242 ProSitePatterns Glutathione peroxidases signature 2. 142 149 IPR029760 -
Bva10g00453 242 PRINTS Glutathione peroxidase family signature 139 155 IPR000889 GO:0004602|GO:0006979
Bva10g00453 242 PRINTS Glutathione peroxidase family signature 204 213 IPR000889 GO:0004602|GO:0006979
Bva10g00453 242 PRINTS Glutathione peroxidase family signature 103 120 IPR000889 GO:0004602|GO:0006979
Bva10g00453 242 PANTHER GLUTATHIONE PEROXIDASE 9 242 IPR000889 GO:0004602|GO:0006979
Bva10g00453 242 ProSiteProfiles Glutathione peroxidase profile. 75 242 IPR000889 GO:0004602|GO:0006979
Bva10g00453 242 SUPERFAMILY Thioredoxin-like 84 241 IPR036249 -
Bva10g00453 242 ProSitePatterns Glutathione peroxidases active site. 105 120 IPR029759 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00453 Bva-Chr10 4638476 4642147 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00453 K00432 - tcc:18587695 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00453 10 4638476 4642147 Bva10g00453 10 4638476 4642147 ECH