Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00446 ATGGAGTTGATTCTCAGAATCACTCTCTTGTTTGCTCTCTGTATTATCTTCAGCAATCTTTCTCATTCGCGTGCCGTAGAGTCATCATCCCATTGTAAAGCATGGCTCGTGCAATCCATCCCCACCGACATGCCACACCTCTCCCACGTCCCCGGCGTCCTCTCTACAGGCGATGTGTTCCGGTGGTTGGCGGCAAACTCTACTAGAAAACTTGACATAACTGCTCAATACTGGCAATTGGTAGCTTCTCCTACCGATCCTCGTTCCGGGGATTATGGATACTCGGAGAGTGATATGCACAAATTTGGTGCCCATGAAGGTGCTGCCGTCTACAAAGCTATAGATGATGCTGCTGATCGCAATGTTACTGTCAGGCTACTGTCTCACTCTGGAGTGTATCCCGACTTCACCAAAGAACCATCTGAACTTGCTTTAGGAAGGTCAAATGTTAAGAATGTGACGTTACTGCTAAGTGAATGGTGGGGTTCGGGCATAATCCATGCCAAAGTATGGATATCAGATAGTCGAGATGTTTATATTGGATCTGCAAACAATGACTGGAAATCTCTTACGCAGGTCAAAGAAGTTGGAATTTATATTGCTGGGTGTCCAGAAATAGCTAAGAAGGTCCAAGTCTACTTTGACAATTTATGGACGCTCGCATTTATTAATTCTTCAGATTATACAAAAATGATATCAGATCAGCAGTGGCAAGTTGATAGGAAGGTTCCTTGCTGGTCGCATTTCATTGATTCTAAAGAAAGGTGCAAGTCACCTCTTCCTCAATATGTGGAGACACCTCACGTAGCAGGATATCCTGTTCTGTATGACCCTTATATTTTCAAAGCTTCAATTCAAACTCCTGGGAATAACTATTCAACACTAGATCCCCAACTCAGCTATCTCTCCTTTGCTCCCCCAGAGGTAATAAGGGTCTACAAGGCTATATCCCCAAAATCTGGCTGTACTAGCTTGTGCGATACTTTGTGGACACTGTTTCTTGGCAATCCATTATCATTTGGCAAGTATCAGGCTGATGAGCAAGCGTGGATTGATACTATTAAATCTGTCGGAGTGAGAGGGGTGGTCAGAATCAATACCATGGACTGGCTGGGTCAGTCAGAATTTGTAGACCCAACGGTTTACTGGTCATCCCTATCCACCGCAATATCAGAGGTTGTCTTCGGCAAGCATGCAACAGTAAAGATATTGGTGGCATATTGGGCACATTTCATCAACAACACAGATCTGTATCTGAATTATCTCCTCTACTCCAACAATCTTTGCTCTTCTTCTAAGTACAACAAATGCTCTGGAAAAGTTGAGATCAAGTATTATGTGGTTCCTGGTTTCAACTTGACAGGACCTGCCATTCAGGGTGGAGCTAGCACAGGAAATATATACCCTGGTTTTACAAGGGTCAATCATGGGAAATATGCAGTTAGCGATGAAAGGGCCCACATTGGGACAAGCAATCTTGTATGGGATTACTTCTATACAACAGCTGGTGTTAGCTTTGGGACATACAACCCTGCCATAGTTTCGCAACTGAAACTAGTGTTTGATGCTGACTGGAATTCGCCTTATGCGGTTCCAGTTCAAGAATTTGGGGTAAGTGATGCTATGTCATCATCTGAACCTTTCTA 1646 0.438 MELILRITLLFALCIIFSNLSHSRAVESSSHCKAWLVQSIPTDMPHLSHVPGVLSTGDVFRWLAANSTRKLDITAQYWQLVASPTDPRSGDYGYSESDMHKFGAHEGAAVYKAIDDAADRNVTVRLLSHSGVYPDFTKEPSELALGRSNVKNVTLLLSEWWGSGIIHAKVWISDSRDVYIGSANNDWKSLTQVKEVGIYIAGCPEIAKKVQVYFDNLWTLAFINSSDYTKMISDQQWQVDRKVPCWSHFIDSKERCKSPLPQYVETPHVAGYPVLYDPYIFKASIQTPGNNYSTLDPQLSYLSFAPPELSFGKYQADEQAWIDTIKSVGVRGVVRINTMDWLGQSEFVDPTVYWSSLSTAISEVVFGKHATVKILVAYWAHFINNTDLYLNYLLYSNNLCSSSKYNKCSGKVEIKYYVVPGFNLTGPAIQGGASTGNIYPGFTRVNHGKYAVSDERAHIGTSNLVWDYFYTTAGVSFGTYNPAIVSQLKLVFDADWNSPYAVPVQEFGVSDAMSSSEPF 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00446 519 CDD PLDc_vPLD3_4_5_like_2 301 497 - -
Bva10g00446 519 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 162 189 IPR001736 GO:0003824
Bva10g00446 519 PANTHER PHOSPHOLIPASE D - RELATED 6 506 - -
Bva10g00446 519 SUPERFAMILY Phospholipase D/nuclease 107 220 - -
Bva10g00446 519 Pfam PLD-like domain 107 218 IPR025202 -
Bva10g00446 519 Gene3D Endonuclease Chain A 56 222 - -
Bva10g00446 519 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 442 468 IPR001736 GO:0003824
Bva10g00446 519 SMART pld_4 442 468 IPR001736 GO:0003824
Bva10g00446 519 SMART pld_4 162 189 IPR001736 GO:0003824
Bva10g00446 519 Gene3D Endonuclease Chain A 310 499 - -
Bva10g00446 519 PANTHER GM01519P-RELATED 6 506 - -
Bva10g00446 519 CDD PLDc_vPLD3_4_5_like_1 36 203 - -
Bva10g00446 519 SUPERFAMILY Phospholipase D/nuclease 319 506 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00446 K16860 - jre:109005216 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00446 10 4601510 4604685 Bva10g00446 10 4601510 4604685 ECH