Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00445 ATGCAGAGATTGAAAGCTCTGCTACCAGCTAGTAGGTGCTCGTTTCGTAGATTCGGCTCTCATTCCCGAGGTTTCTCCGCTCAACCAGACTACATCAGGCATGATGATTCTCAGGACCAGattttagttGAAGGAAGAGCTAAATCGAGAGCAGCTGTTCTCAACAGACCATCTTCTCTTAATGCACTCACTACTTCAATGGTAGCTCGACTGAAGAGATTGTATGATTCATGGGAAGAAAACTCTGATATTGGCTTTGTTTTAATGAAGGGTAGTGGCAGGGCTCTCTGTTCTGGCGCAGATGTTGTTAGGCTTTATCACTTACTGAATGAAGGAAATACTGAAGAAGCAAAGCAGTTTTTCAAGATGTTATATTCGTTTGTATATCTTCAAGGGACATATTTTAAGCCACATGTTGCAATTATGGATGGTATAACAATGGGATGCGGAGCTGGAATTTCACTTCCAGGGATGTTCCGTGTGGTAACCGATAAAACTCTTTTTGCTAATCCTGAAGCTCAAATGGGTTTTCACCCTGATGCTGGAGCTTCCTATTATCTTTCTCATCTACCTGGCTACTTAGGGGAATATTTGGCCCTTACCGGAGATAAGCTTAATGGTGCAGAAATGATTGCCTGCGGCCTTGCTACTCACTATTTTCTaaatgaaAGGCTTACTTTGGGCGAAGAACGACTCGGTAAACTGATCACTGATGAGCCTGCTGTTATAGAGGCGTCCCTTGCAGATTATGGTGATCTTGTTTATCCTAACAAGAGGAGTGTTCTTCACaaGATTGAGGCCATTGATAGTTGTTTCAGCCACGACACAGTCGAGGAAATCATTGATTCTTTGGAGAGGGAGGCAGCTGTGTCTTGTGATGAATGGTATACAACAACACTTAAGAAGATAAGAGAAGCTTCGCCATTGAGTTTGAAAGTTACTTTACAATCTATACGTGAAGGTAGATTTCAAACCCTTGATCAATGTCTTGTACGTGAGTATCGGATATCCCTTCGCGGAATTTCTAAGCAGGTGTCCTCCGATTTTTTTGAGGGTGTTCGAGCACGATTGGTGGATAAAGATTTTGCGCCTAAGTGGGACCCACCAAGTTTGAAGGAAGTATCAGATGACATGGTCGAATTATATTTCTCTCCCCTCAACGAAACGGAATCTGAACTGGAGTTGCCAACGGCATTGCGGGAACCTTACATGTA 1214 0.4275 MQRLKALLPASRCSFRRFGSHSRGFSAQPDYIRHDDSQDQILVEGRAKSRAAVLNRPSSLNALTTSMVARLKRLYDSWEENSDIGFVLMKGSGRALCSGADVVRLYHLLNEGNTEEAKQFFKMLYSFVYLQGTYFKPHVAIMDGITMGCGAGISLPGMFRVVTDKTLFANPEAQMGFHPDAGASYYLSHLPGYLGEYLALTGDKLNGAEMIACGLATHYFLNERLTLGEERLGKLITDEPAVIEASLADYGDLVYPNKRSVLHKIEAIDSCFSHDTVEEIIDSLEREAAVSCDEWYTTTLKKIREASPLSLKVTLQSIREGRFQTLDQCLVREYRISLRGISKQVSSDFFEGVRARLVDKDFAPKWDPPSLKEVSDDMVELYFSPLNETESELELPTALREPYM 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00445 404 Pfam Enoyl-CoA hydratase/isomerase 51 383 IPR045004 -
Bva10g00445 404 CDD crotonase-like 53 225 - -
Bva10g00445 404 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 2, MITOCHONDRIAL 2 404 - -
Bva10g00445 404 Gene3D - 35 399 - -
Bva10g00445 404 SUPERFAMILY ClpP/crotonase 46 369 IPR029045 -
Bva10g00445 404 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 2 404 IPR032259 GO:0003860
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00445 Bva-Chr10 4594881 4600691 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00445 1 404 Acyl Lipid Metabolism Gene Families AT4G31810 71.394 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00445 K05605 - gmx:100808892 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00445 10 4594881 4600691 Bva10g00445 10 4594881 4600691 ECH