Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00430 ATGGCCGCCCAAAACTTAATACGCTTTGTAGTCATTATCATCCTTCGCGTGTTTGTGAAAAGTTCTGAATCAATTTCTTCAGATAATTTGTCACCAGCGTCCCCAAGGCGGTTTCCACCTTATCAAGGAGTAAGAGGTGCATATTGGCCTTCGTTTACTGACTTTCCAGCTGCTTCCATTGACACCAAGTACTTCACCCACATTTACTATGCATTCCTCTTACCAGATCCACAGTCTTACAAGATTAATATCACTGAATTGGATCAAACAAAGATACCCGAGTTTATCAACGGCCTTCGTTACAAATACCCTCCGGTGAAGACTCTGTTTTCAATTGGAGGAGGTGGCTACGACCCAAATGTGTTCGCTGCCATGGCAAAAACCCGGCGCACCCGCAAAGTCTTCATTAGTTCTACAATCCAAGTGGCTCGCCATTATGGATTTGACGGGATTGACTTGGATTGGGAATTCCCGGCGAACAAGAAAGACATGGCTAACCTTGCTCTGTTATACGGAGAATGGTATGAAGCTCTGGTTTTGGATGCTAAGATTCATCGGAAGCCACGCTTGCTTCTAACATCGGCAGTGTACTATGCCTCACTAATGGTGAGACTTGGAGATGAGCCAAGATTGTATCCAGGCGAAGCAATTCGGAAATATTTGGACTGGGTTAGCCCCATGTGCTATGACTATCATGGATCCTCCTGGGAAAATTTCACTGGGGCGAACGCAGCACTCTATGATCCCAATAGCAACATCAGCACCCACTACGGAATCGGGTCGTGGATCAAATCCGGTGTTCCACCCGAAAAGCTGGTCATGGGTTTACCCTTATACGGGCGCACTTGGCAGCTCAAGGATCCGAATGTTCATGGGATCGGGGCACCCGCAGTTGGGATTGGGCCTGGGGATGACGGTACTATGGATTATAACCGAATCATGGAATTTAACAAGAAGAATGATGCCACCATTTTATATGATGCAGTCAGCGTTTCGTATTATTCTTACGCGGGGGATTCTTGGATCAGCTACGACGATGTCGGCTCCATCAAAAAGAAGCTTCAATTTGCTAGCTCGCTGGCTTTACGGGGCTATTTTTTTTGGGCTCTTGGCCAGGACGAGGATTGGACCATCTCGAGACAAGggcttaaatattttcataaata 1166 0.4605 MAAQNLIRFVVIIILRVFVKSSESISSDNLSPASPRRFPPYQGVRGAYWPSFTDFPAASIDTKYFTHIYYAFLLPDPQSYKINITELDQTKIPEFINGLRYKYPPVKTLFSIGGGGYDPNVFAAMAKTRRTRKVFISSTIQVARHYGFDGIDLDWEFPANKKDMANLALLYGEWYEALVLDAKIHRKPRLLLTSAVYYASLMVRLGDEPRLYPGEAIRKYLDWVSPMCYDYHGSSWENFTGANAALYDPNSNISTHYGIGSWIKSGVPPEKLVMGLPLYGRTWQLKDPNVHGIGAPAVGIGPGDDGTMDYNRIMEFNKKNDATILYDAVSVSYYSYAGDSWISYDDVGSIKKKLQFASSLALRGYFFWALGQDEDWTISRQGLKYFHK 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00430 388 Gene3D Glycosidases 59 374 - -
Bva10g00430 388 PANTHER CLASS V CHITINASE CHIT5A 33 385 - -
Bva10g00430 388 Gene3D - 278 344 IPR029070 -
Bva10g00430 388 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 43 388 IPR001223 GO:0005975
Bva10g00430 388 SUPERFAMILY (Trans)glycosidases 44 373 IPR017853 -
Bva10g00430 388 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 148 156 IPR001579 GO:0004553|GO:0005975
Bva10g00430 388 SMART 2g34 43 373 IPR011583 GO:0008061
Bva10g00430 388 CDD GH18_plant_chitinase_class_V 44 379 - -
Bva10g00430 388 Pfam Glycosyl hydrolases family 18 47 373 IPR001223 GO:0005975
Bva10g00430 388 PANTHER CHITINASE 33 385 - -
Bva10g00430 388 SUPERFAMILY Chitinase insertion domain 279 344 IPR029070 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00430 Bva-Chr10 4501774 4502940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00430 44 380 Glycoside Hydrolase AT4G19810 41.124 1.09e-89 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00430 K01183 - gmx:100787511 478.789