Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00416 ATGGAGCCGGACGTGAGCATTGAGAGATCGTCGATGATTCAGGTGGCGGTGCTGCCGGTCGGTACAGTGCCGCCGAATGTGCTGCGAGACTACTACTCTATGCTGCTTCATCTGCACACAATTCCACTCTCAGCGATCAGCTCCTTTTACACGGAGCGTCAGAAATCTCCATTCGCTCACCAACCATGGGACTCAGGGTCCATCCGGTTCAAATTTGTTCTGGGAGGTCAACCTGCAAGCCCATGGGAGGACTTCCAATCTCACCGTAAAACCCTCGCTGTCATAGGCATTTGCCATTGCCCTTCCTCACCGGATCTTGATTCCGTTATCGACCAATTCTCTAATGCCTGCAAGTCTTATCCTTCCTCGCTTGTGGATCGATGCTTTGCATTTTGTCCAGGTGATTCGCAGCTAGAGGAGGGAAGTAAAAAGGGAGGTAATTTGAGGCTGTTTCCTCCTGCTGATCGCCAAACTCAGGAATTCCACTTGAACACTATGATGCAAGAAATTGCTGCCTCACTGTTGATGGAATTTGAAAAGTGGGTGCTTCAGGCTGAATCTTCAGGAACAATACTCAAGACCCCGTTAGATTCTCAAGCTAGTCTCAGCTCAGAGGAGGTTATCAAGGCCAAAAAACGGAGACTTGGTCGTGCACAGAAGACCATAGGTGATTATTGTTTATTGGCAGGATCCCCAGTTGATGCCAATGCCCATTACTCTACTGCACTGGAACTTGCTAGGTTGACTGGGGATTATTTCTGGTATGCTGGGGCAATGGAGGGCAGCGTTTGTGCCTTAGTGATTGACCGCATGGGCCAGAAAGACTCAGTCTTGGAGGAAGAGGTTAGATATCGTTACAACAATGTTGTCATCTTGAATTACAAGTCCCAAGATAATGCTCAGAGAGTTTCTCCTCTAAGCTTTGGACTCGAGGCCACTTTGAAATTGGCAAGGTTTCTCTGCAGGAGAGAGTTGGCCAAGGAGGTGGTGGAGTTGTTGACCAATGCTGCAGATGGTGCTAAAGCTTTAATAGATGCCAGTGATAGGCTCATATTGTATGTTGAAATAGCTCGCTTATATGGCAGTCTTGGTTACCAGAGAAAAGCTGCGTTTTTCTCAAGGCAGGTAGCTCAGTTATATATGCAACAGGAAAATAATCTTGCTGCTATTAGTGCTATGCAAGTTTTGGCAATGACCACGAAAGCATATCATGTTCAAAGTAGAGCATCAATCTTTGGTAACTCTCAGAACAATAAGGGAACCGGATCTAGTAATGCTGATAATGGGAAAACATTTCACCAATCAGCTGTCTCACTATTTGAGTCTCAATGGAGCACCATCCAGATGGTTGTATTGAGAGAAATTCTGCTCTGCGCTGTTCGGACAGGGGATCCTCTTACTGCCTGGAGTGCAGCAGCACGACTTCTGAGATCTTATTATCCTTTAATAACTCCTTTTGGGCAAAATGGCCTTGCTAATGCGCTTTCAAATTCAGCTGAAAGGCTGCCACCAGGAACTCGTTGTGCTGATCCTGCTTTACCTTTTATAAGGTTGCATAGTTTCCCTCTTCAGCCAACACAGATGGACATTGTGAAACGCAATACAGCAAGAGAAGACTGGTGGGCAGGTTCTGCTCCTTCGGGCCCTTTTATTTATACACCATTCAGCAAAGGAGAccctaataatattattaagaagCAGGAGCTTATTTGGATTGTTGGAGAGCCTGTCGAGGTCTTGGTGGAGTTGGCAAACCCATGTGGCTTTGATCTAAGGGTTGATAGCATCTATCTATCTGTGCATTCAGGAAATTTTGATGCTTTCCCTGTAAGTGTAAATCTCCCACCAAATTCATCAAAGGTGATTATATTATCAGGCATTCCAACATCAGTGGGGCCAGTTACCATTCCTGGATGCGTTGTTCATTGTTTCGGTGTAATTACTGAACACCTGTTCAGGGATGTTGACCATTTGCTTCTTGGAGCAGCACAAGGACTCGTGCTTTCTGACCCTTTCAGATGCTGTGGATCTCCGAAGTTGAAGAATGTACCTGTTCCTAATATTTCTGTGGTACCACCACTACCATTGCTGCTGTCACACGTTATTGGCGGTGATGGAGCCATCATTTTGTATGAAGGTGAAATTCGTGATGTATGGATAAGTCTGGCTAATGCTGGCACAGTGCCAATCGAACAGTTACATATTTCACTATCAGGGAAAAACCAAGATTCAGTAATTTCATATTCTTGTGAAACTTTAAAATCTTGCCTTCCTCTGAAACCTGGATCAGAAGTGACTTTGCCTATAACCCTAAGAGCCTGGCAGGTTGGCCTGGTAGATCCTGATATTGGTGTTGGGAGTATTATTAGGCATTCCAAAGATGGAAGCAGCCCATCATTATTGATCCATTATGCTGGGCCACTAATAACCCCTGGAAATCCTTCAACAAATGGATCTACTGTGCCCCCTGGTAGGCGCCTTTTTGTTCCTCTGCAGATTTGTGTTTTGCAAGGTTTGTCTTCTTTCAAGGCTCGTCTATTGTCAATGGAGTTTCCTGCACATGTTGGTGAAAATATTCCAAAGTTGGTCCATGTGGAAAATAACTCTACCGGAGGACATATTAACTCTCGGGCAAAAACGGACAGATTGGTGAAAATTGATCCCTTAAGAGGAAGTTGGGGACTGCGATTTCTTGAACTTGAGTTGTCTAATCCAACTGATGTTGTGTTTGAAATCAGTGTCTCTGTACAACTGGAGAGCTCCAGTGATGATGATAATGCTGCTGCTGATCAGGATACTTCTGAATATGGTTATCCTAAAACAAGAATCGATAGGGATTGTTCAGCCAGGGTTCTAGTGCCTCTTGAGCATTTTAAATTACCTGTTCTTGATGATTTCTTTATGAAGGATGTTCAGGCTGATGGGATTAGTGGAAGCAAAAGTGCATTTTTCTCTGAAAGGAACACCAAAGCTGAACTCAATGCCTGTATTAAGAACCTTATATCTAGAATAAAGGTTAGATGGCATTCAGGCCGCAATAGCTCTGGAGAATTAAATATCAAGGATGCTATCCAGGCAGCTCTGCGGACATCAGTTATGGATGTGCTGCTGCCAGATccgttgacatttggcttcaggcTTGTTAGAAatggttttgaatttgaatcagAAAAACCTGATGCTGATAAAGAATCCAACGTTTATGTTGAGTCGCTGGCATCAAAAGATTCTGTTCGTGCACATGAAATGACTCCAATGGAGGTTCTTGTCCGTAATAACACAAAGGATCTGATCAAAATGAGTCTTAATATTACATGTAGAGACGTAGCTGGGGAAAACTGTGTAGATGGGAGCAAGGCAACGGTTCTGTGGACTGGCGTTCTGAGTGATGTGACTATGGAAATTCCCCCActtcaagaaattaaacattatttCTGCTTGTATTTTTTGGTCCCGGGAGAGTACACATTGGTAGCCGCTGCAGTGATCAACGATGCAAACGACATCCTTCGGACGCGTGCCAGGACCAAGTCAGCTGATGAGCCAATTTTCTGTCGCGGACCACCATATCACGTTCGTGTCCTTGGGACTGCATG 3596 0.4377 MEPDVSIERSSMIQVAVLPVGTVPPNVLRDYYSMLLHLHTIPLSAISSFYTERQKSPFAHQPWDSGSIRFKFVLGGQPASPWEDFQSHRKTLAVIGICHCPSSPDLDSVIDQFSNACKSYPSSLVDRCFAFCPGDSQLEEGSKKGGNLRLFPPADRQTQEFHLNTMMQEIAASLLMEFEKWVLQAESSGTILKTPLDSQASLSSEEVIKAKKRRLGRAQKTIGDYCLLAGSPVDANAHYSTALELARLTGDYFWYAGAMEGSVCALVIDRMGQKDSVLEEEVRYRYNNVVILNYKSQDNAQRVSPLSFGLEATLKLARFLCRRELAKEVVELLTNAADGAKALIDASDRLILYVEIARLYGSLGYQRKAAFFSRQVAQLYMQQENNLAAISAMQVLAMTTKAYHVQSRASIFGNSQNNKGTGSSNADNGKTFHQSAVSLFESQWSTIQMVVLREILLCAVRTGDPLTAWSAAARLLRSYYPLITPFGQNGLANALSNSAERLPPGTRCADPALPFIRLHSFPLQPTQMDIVKRNTAREDWWAGSAPSGPFIYTPFSKGDPNNIIKKQELIWIVGEPVEVLVELANPCGFDLRVDSIYLSVHSGNFDAFPVSVNLPPNSSKVIILSGIPTSVGPVTIPGCVVHCFGVITEHLFRDVDHLLLGAAQGLVLSDPFRCCGSPKLKNVPVPNISVVPPLPLLLSHVIGGDGAIILYEGEIRDVWISLANAGTVPIEQLHISLSGKNQDSVISYSCETLKSCLPLKPGSEVTLPITLRAWQVGLVDPDIGVGSIIRHSKDGSSPSLLIHYAGPLITPGNPSTNGSTVPPGRRLFVPLQICVLQGLSSFKARLLSMEFPAHVGENIPKLVHVENNSTGGHINSRAKTDRLVKIDPLRGSWGLRFLELELSNPTDVVFEISVSVQLESSSDDDNAAADQDTSEYGYPKTRIDRDCSARVLVPLEHFKLPVLDDFFMKDVQADGISGSKSAFFSERNTKAELNACIKNLISRIKVRWHSGRNSSGELNIKDAIQAALRTSVMDVLLPDPLTFGFRLVRNGFEFESEKPDADKESNVYVESLASKDSVRAHEMTPMEVLVRNNTKDLIKMSLNITCRDVAGENCVDGSKATVLWTGVLSDVTMEIPPLQEIKHYFCLYFLVPGEYTLVAAAVINDANDILRTRARTKSADEPIFCRGPPYHVRVLGTA 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00416 1198 PANTHER TRAPP II COMPLEX, TRS120-RELATED 1 1196 - -
Bva10g00416 1198 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 10 191 IPR013935 -
Bva10g00416 1198 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 327 742 IPR013935 -
Bva10g00416 1198 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 201 268 IPR013935 -
Bva10g00416 1198 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 1 1196 IPR013935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00416 Bva-Chr10 4434308 4446322 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00416 K20306 - gmx:100305609 2023.44