Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00393 ATGAAGAAAGTTTGTTGGCCTTACTTTGATCCTGAATTTGATACTCTCCCAGAAAGAATATATGGCCCCACTTGCAGAGTCTGTATTGACAATGAAAGCACAGAGGATTCCACGGTAGTAAAGGTAGACAGCGTTAATAAGCAGGGTCTTCTTCTGGAAGTGGTTCAAGCTTTGACAGATTTGGACCTTCAAATCTGCAAAGGCTATATTTCATCTGACGCAGGCTGGTTCATGGACGTGTTTCACGTAAGAGACAAACACGGCAACAAACTCAGGGACCAGAAATTGATTAACTATATCCAGCAGGACGTAGGAAGATCAAAGGGATCTACGCAGAGCGTGAATACCTATAATTCCAATGAGGTTTTCCCCTACGTTTCCCAAAATGAACACACCGCCATTGAAATGACCGGAGCTGACCGCCCCGGTCTCTTTTCCGAGATCTCTGCCGCCTTAGCCGATCTCCATTGTAACATCATCGAAGCTCATGCATGGAGCCACAATGCTCGGTTGGCCTGTGTCGCCTACATTTCGGATCAGTCCACGGATTCCCCCATCGACGATCCCGGCCGCCTCGCCTCCATTGAGGACCATCTCACCACCGTGCTCCGAGCCACCACCAACCCTAATAGTCCTCTTGGTGTTGGCAGACTCGCCAACGACCAACAAGAGGTGAAGACTGCCGAGTTTCTTGGAGGAGAAGGCACCATGACCACCGTGGAACGACGGTTGCACCAGCTCTTGCTTTCCTTGCGAGATTTCGAGAGGCCGTCGAAATTTGAGGATGATGTGGGAAGGAAAACGACGGTGGTGAGGATTGAAAGCTGCGAGCAAAAGGGGTATTCTATTGTGAGCATAGAGTGTGAGGACCGGCCAAGGCTCATGTTTGACACTGTATGCACACTCACCGACATGCAGTATGTCATTTTTCACGCTTCCGTTACTTCGCAATCGCATGGAGGCTCCTCCTTTCAGGAGTACTTTATCCGGCATGTAGACGGGCACGCTGTGAATACAGAAAGCGAGAAGGAACGCGTAGTGAAATGCTTAGAGGCAGCCATAGAAAGGAGGGTGTGCGAGGGAGTTCGGCTAGAGTTGTGTGCAGAAAATAGAGTCGGGTTGCTGTCTGATATAACCAGAGTCCTTAGAGAGAACGGGCTTGCTGTGGTTCGAGCAGACGTGGAAACACATGGCCACAATGCTGTCAATGCTTTCTATGTGAGGGATGTGTCAGGGAACCAAGTTGACGTTGGATACTTCGTTGAGTCGGTGAAGAGAGAGATGGGTCCTATCGATCTCCATATCAAGAATGAGATTagatcatcatcatcaccatcaTCAAGCAACTCACCCGCCCGTCTCTCATTCGGAGACATGCTAAGATCCAGGATTGAACGCCTCTCTCATGGCTTTCATCCTATCAAGTG 1427 0.4877 MKKVCWPYFDPEFDTLPERIYGPTCRVCIDNESTEDSTVVKVDSVNKQGLLLEVVQALTDLDLQICKGYISSDAGWFMDVFHVRDKHGNKLRDQKLINYIQQDVGRSKGSTQSVNTYNSNEVFPYVSQNEHTAIEMTGADRPGLFSEISAALADLHCNIIEAHAWSHNARLACVAYISDQSTDSPIDDPGRLASIEDHLTTVLRATTNPNSPLGVGRLANDQQEVKTAEFLGGEGTMTTVERRLHQLLLSLRDFERPSKFEDDVGRKTTVVRIESCEQKGYSIVSIECEDRPRLMFDTVCTLTDMQYVIFHASVTSQSHGGSSFQEYFIRHVDGHAVNTESEKERVVKCLEAAIERRVCEGVRLELCAENRVGLLSDITRVLRENGLAVVRADVETHGHNAVNAFYVRDVSGNQVDVGYFVESVKREMGPIDLHIKNEIRSSSSPSSSNSPARLSFGDMLRSRIERLSHGFHPIK 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00393 475 ProSiteProfiles ACT domain profile. 133 213 IPR002912 -
Bva10g00393 475 SUPERFAMILY ACT-like 128 203 IPR045865 -
Bva10g00393 475 SUPERFAMILY ACT-like 34 98 IPR045865 -
Bva10g00393 475 CDD ACT_ACR_3 281 357 - -
Bva10g00393 475 Gene3D - 126 208 - -
Bva10g00393 475 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR2 2 472 - -
Bva10g00393 475 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 2 472 IPR040217 -
Bva10g00393 475 SUPERFAMILY ACT-like 361 427 IPR045865 -
Bva10g00393 475 Gene3D - 362 428 - -
Bva10g00393 475 ProSiteProfiles ACT domain profile. 363 442 IPR002912 -
Bva10g00393 475 Pfam ACT domain 133 193 IPR002912 -
Bva10g00393 475 CDD ACT_ACR_2 132 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00393 Bva-Chr10 4328247 4330916 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00393 - - gmx:100820595 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00393 10 4328247 4330916 Bva10g00393 10 4328247 4330916 ECH