Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00392 ATGAAGCAAAGTTTGTCTGAGGCAGTCCCGTCTTTATCTTCTGCATCCGCTTCGACAGACCAATCACGTCCTGCCACTTCATCGTCCTCATATTTGGCGTCATCGGAGAAACCGGGCACCTTAGTGTCCTCAGCGGCCGCCGCAGAAGACTTGGCTATGGGGTCGAGGGATGGAGGCGGCGCCCAAGAGACGGTGACCGTTGATCGCCGGTGCGAGTACTCCGCTGTTTGCAGATGGACggtaaataattttccaagaaTAAAAGCTAGGGCATTGTGGAGCAAATACTTCGAGGTCGGAGGCTATGATTGCCGTCTTTTGATATACCCTAAGGGTGACTCCCAGGCTTTGCCAGGCTACATCTCCATCTATCTCCAAATCATGGACCCTCGGGGCACTTCGTCTTCCAAATGGGACTGTTTTGCTAGCTATCGTTTAGCAATTGTGAACGTTGCCGACGATTCCAAGACCATTCATCGGGATTCGTGGCACCGGTTCTCAAGTAAGAAAAAATCCCACGGGTGGTGTGATTTTACGCCTTCCTCAACTGTATTTGATCCAAAATTGGgttatttgtttaataatgATTCCGTATTGATAACCGCTGATATACTTATTCTCAATGAGTCGGTTAATTTCACTCGAGATAACAATGAGTTGCAATCATCAGCATCATCTTCATCGTCCATGATATCTTCCTCTGTGGTTGCTGGGCCAGTGTCCGACGTCTTGAGTGGAAAGTTCACTTGGAAAGTGcataattttagtttgtttaagGAAATGATAAAAACCCAGAAGATAATGAGCCCGGTTTTTCCAGCAGGAGAGTGTAATTTGAGGATTAGTGTATATCAGAGCTCGGTTAATGGGGTTGAGTATCTATCAATGTGTTTGGAAAGCAAGGATACGGACAAGACGGTAATGTTGTCTGATAGGAGTTGCTGGTGTTTATTTCGAATGTCAGTCTTGAACCAGAAGCCAGGCTCGAATCACATGCACAGGGATTCATATGGGCGGTTTGCAGCAGATAATAAGAGTGGTGACAATACGAGTCTGGGATGGAATGATTATATGAAGATGTCGGATTTTATTGGGACTGATTCAGGGTTTTTGTTAGATGACACTGCAGTTTTTAGTACTTCATTTCATGTGATAAAGGAGTTTAGTAGCTTCTCTAAGAATGGAGGTATAATTGCTGGGAGAAGTGGGAGTGGGGCAAGGAAATCAGATGGCCATATGGGAAAATTCACTTGGAGGATTGAGAATTTTACAAGGTTGAAGGatttattgaagaaaaggaaaattacgGGTCTATGCATCAAGAGCAGGAGATTTCAAATTGGTAATCGGGATTGCCGTCTTATTGTTTATCCCCGAGGGCAGTCTCAGCCACCATGCCACCTTTCAGTGTTTCTTGAAGTTACAGATTCAAGAAATACTTCCAGTGATTGGAGTTGTTTTGTCAGTCATCGATTATCTGTTGTGAACCAGAGGATGGAGGAGAAATCTGTCACTAAAGAATCTCAGAACCGCTACTCAAAAGCTGCTAAGGATTGGGGCTGGCGTGAATTCGTGACACTTACAAGTCTCTTTGATCAGGATTCCGGTTTTCTTGTTCAAGACACTGTTGTATTCTCTGCAGAAGTTCTTATATTGAAAGAGTCATCAACATTGCAGGATTTTGCTGATCATGATGCGGAGTTAAGCAGCGGTGGTTCCCTTGTGGATGCAAAAAGAAGTTCATTTACATGGAAAGTGGAGAATTTCCTGTCTTTTAAGGAAATAATGGAGACTCGGAAAATCTTCAGTAAATTTTTTCATGCTGGTGGATGTGAGCTTCGGATTGGTGTTTACGAGTCCTTTGACACCATATGCATCTACTTAGAGAGTGACCAGGCTGTTGGTATTGATCCAGATAAAAACTTCTGGGTCAAGTACAGAATGGCCGTGGTGAATCAGAAGAATCCAGCAAAGACAGTGTGGAAGGAGTCCTCTATCTGTACAAAGACATGGAATAATTCTGTTTTGCAATTCATGAAAGTGTCGGATATGTTGGAAGCAGATGCAGGGTTTCTTGTCCGTGATACTGTTGTTTTTGTCTGTGAAATATTGGATTGCTGCCCTTGGTTTGAGTTTTCAGACTTAGAGGTTTTAGCTTTGGAGGATGACCAGGATGCTTTGACTACTGATCCTGATGAACTCATTGACTCTGAAGACAGTGAAGGAATAAGTGGAGATGAAGAAGATATTTTCAGAAATCTTCTTTCCAGAGCTGGATTTCACCTAACATATGGGGATAATCATTCACAGCCACAGGTTACTTTAAGAGAAAAACTTTTAATGGATGCTGGTGCAATTGCAGGGTTCCTGACTGGACTCCGGGTTTACCTCGATGATCCTGCTAAAGTCAAGCGTTTACTTCTTCCAACCAAGCTCTCTGGCAGTTCTGATGGGAAGAAAGTCTCCAAGGCTGATGAGTCTTCCCCTAGCTTGATGAATTTGCTGATGGGAGTTAAGGTGTTGCAGCAGGCAATCATTGATTTACTTTTGGATATAATGGTGGAGTGCTGTCAACCTTCAGAAGGGGGTTCTGTTGCTGATTCTCTTGATGCATGCTCAAAACCTTCTCCAGATGTCAGTGGAGTTGCTAGTTCTCTGGAATGTGATAGAGAAAATGATGCAGCAGAATCTGCACAATTTCCTGTTTATGAGAGATTGGATTCTGTTTCTGAAGAAAGTACCAGTACCTCTGCTGTACAGAGCTCTGATTTAAATGTTACTGCTCTCCAGGAAAAAGCTCTTCCTGGACAGCCTATTTGTCCACCTGAAACATCTGCTACTGGTTCAGAAAATGCATCCTTACGCTCAAAGACCAAGTGGCCAGAACAATCTGAGGAGCTCTTAGGTTTAATTGTAAACTCACTAAGAGCCTTGGATGGTGCTGTTCCACAAGGGTGTCCTGAGCCAAGACAACGGCCTCAGTCTGCACAGAAAATTGCTATTGTATTGGACAAAGCTCCTAAGCATTTGCAAACAGATCTAGTTGCTCTTGTACCCAAATTGGTTGAGCATTCAGAACATCCACTGGCTGCCTTTGCACTTCTTGAGCGGCTTCAAAAGCCAGATGCAGAACCTGCTTTGCGAATACCTGTTTTTGGGGCTCTTAGTCAACTGGAGTGTGGTAGTGAAGCGTGGGAGCATGTTCTATTCCAATCATTTAATCTTTTGACAGACTCAAATGATGAACCCCTTGCAGCAActatagattttatatttaaagcaGCATCTCAATGTCAACATCTCCCTGAAGCAGTCAGATCTGTTCGTGTCAGGCTGAAAAATCTTGGTCTTGAGGTGTCACCTTGCGTCCTTGACTTTTtgagtaaaactataaatagtTGGGGTGATGTTGCTGAAACCATACTGAGGGACATTGATTGTGATGATGATTATGGTGACAATTGCTCAGTACTACCTTGTggacttcttttatttagtgAACATGGCAGCAGTCCTACTGGACTGCATGTGGTAGATGAGCAGGCCTTCCAGGCTagtcatcatttttctgacaTTTACATACTGATTGAGATGTTATCTATTCCTAGTCTTGCTGTTGAAGCTTCTCAAACATTTGAGAGAATTGTATCTCGAAGTGCAATTGTTGCTCAATCTGTTGCATTGGTTTTGGAAAGGCGTCTCTCTCAAAGATTGAATAGTAATGGTAGATATGTTGgcaaaaattttcaacattcAGATGTTGTAGTTGAGGGAGATGCCAATGAACAATTAGGAGTTCCAGGGGATGATTTCACTTCAGTTCTTGGTCTTGCTGAGACATTGGCCCTCTCCAGAGACCCATGTGTGAAAGAATTTGTAAAATTGCTGTACACAATATTGTTTAGATGGTATGCCAATGAATCTTATCGAGCAAGAACCCTGAAGAGGCTTGTTGACCGAGCAACTAGCACTACTGATAATAGCCGTGAAGTAGATTTGGATTTAGATATCTTGGTTAATTTGGTCTGTGAGGAGCAGGAAATTGTTAGACCTGTTTTGAGTATGATGCGTGAAGTTGCTGAACTTGCAAATGTTGATCGTGCTGCTCTGTGGCACCAGTTATGTGCCAGTGAGGATGAAATTATTCGCATTCGcgaagaaaggaaagctgaGATTTCTAATATGGCAAGGGAGAAAGCTATTTTATCACAAAAACTGAGTGAATCTGAGGCCATAAATAGTCGTCTCAAGTCTGAAATGAGGGCTGAGATGGATCGGTTTGCTCGGGAAAGAAAGGAGTTATCTGAACAAATACAAGAAGTTGAGAGTCAGCTTGAGTGGCATCGATCTGAGCGGGATGATGAAATAGCAAAGCTCTCTGCAGAAAAGAAAGCTCTTCAGGACCGTCTGCATGATGCAGAGGCACAACTTTCACAACTGAAGTCACGGAAACGTGATGAATTAAAGAAAGTAGTCAAGGAGAAAAACGCACTTGCTGAAAGATTGAAAAGTGCCGAAGCCGCAAGGAAGAGATTTGATGAAGAATTGAAAAGATATGCCACAGAGAATGTGACTCGGGAAGAAATCCGGCAATCTCTTGAGGATGAAGTTCGTAGACTGACACAAACAGTTGGACAAACTGAGGAAGAAAAACGAGAGAAGGAGGATCAGATTGCTAGGTGTGAAGCGTATATTGATGGCATGGAATCAAAATTGCAGGCCTGCCAGcAATATATTCACACGCTTGAGGCTTCACTCCAGGAGGAAATGTCACGACATGCCCCTCTCTATGGTGCTGGTCTTGATGctttatcaatgaaagaatTGGAAACACTAGCGCGTATACACGAAGAAGGGCTGAGGCAGATTCATGCCCTTCAACAGCGTAAAGGGAGTCCAGCTGGGAGTCCTCTTGTGAGTCCCCATACTCTCCCACACAATCATGGGTTATATCCTGCTGCTTCGCCTCCTATGGCTGTGGGACTGCCTCCCTCACTCATCCCAAATGGGATAGGAATTCACAGCAATGGGCATGTTAACGGTGCAGTTGGACCCTGGTTTAATCACACTTG 5072 0.4221 MKQSLSEAVPSLSSASASTDQSRPATSSSSYLASSEKPGTLVSSAAAAEDLAMGSRDGGGAQETVTVDRRCEYSAVCRWTVNNFPRIKARALWSKYFEVGGYDCRLLIYPKGDSQALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIVNVADDSKTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDPKLGYLFNNDSVLITADILILNESVNFTRDNNELQSSASSSSSMISSSVVAGPVSDVLSGKFTWKVHNFSLFKEMIKTQKIMSPVFPAGECNLRISVYQSSVNGVEYLSMCLESKDTDKTVMLSDRSCWCLFRMSVLNQKPGSNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFIGTDSGFLLDDTAVFSTSFHVIKEFSSFSKNGGIIAGRSGSGARKSDGHMGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQRMEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVVFSAEVLILKESSTLQDFADHDAELSSGGSLVDAKRSSFTWKVENFLSFKEIMETRKIFSKFFHAGGCELRIGVYESFDTICIYLESDQAVGIDPDKNFWVKYRMAVVNQKNPAKTVWKESSICTKTWNNSVLQFMKVSDMLEADAGFLVRDTVVFVCEILDCCPWFEFSDLEVLALEDDQDALTTDPDELIDSEDSEGISGDEEDIFRNLLSRAGFHLTYGDNHSQPQVTLREKLLMDAGAIAGFLTGLRVYLDDPAKVKRLLLPTKLSGSSDGKKVSKADESSPSLMNLLMGVKVLQQAIIDLLLDIMVECCQPSEGGSVADSLDACSKPSPDVSGVASSLECDRENDAAESAQFPVYERLDSVSEESTSTSAVQSSDLNVTALQEKALPGQPICPPETSATGSENASLRSKTKWPEQSEELLGLIVNSLRALDGAVPQGCPEPRQRPQSAQKIAIVLDKAPKHLQTDLVALVPKLVEHSEHPLAAFALLERLQKPDAEPALRIPVFGALSQLECGSEAWEHVLFQSFNLLTDSNDEPLAATIDFIFKAASQCQHLPEAVRSVRVRLKNLGLEVSPCVLDFLSKTINSWGDVAETILRDIDCDDDYGDNCSVLPCGLLLFSEHGSSPTGLHVVDEQAFQASHHFSDIYILIEMLSIPSLAVEASQTFERIVSRSAIVAQSVALVLERRLSQRLNSNGRYVGKNFQHSDVVVEGDANEQLGVPGDDFTSVLGLAETLALSRDPCVKEFVKLLYTILFRWYANESYRARTLKRLVDRATSTTDNSREVDLDLDILVNLVCEEQEIVRPVLSMMREVAELANVDRAALWHQLCASEDEIIRIREERKAEISNMAREKAILSQKLSESEAINSRLKSEMRAEMDRFARERKELSEQIQEVESQLEWHRSERDDEIAKLSAEKKALQDRLHDAEAQLSQLKSRKRDELKKVVKEKNALAERLKSAEAARKRFDEELKRYATENVTREEIRQSLEDEVRRLTQTVGQTEEEKREKEDQIARCEAYIDGMESKLQACQQYIHTLEASLQEEMSRHAPLYGAGLDALSMKELETLARIHEEGLRQIHALQQRKGSPAGSPLVSPHTLPHNHGLYPAASPPMAVGLPPSLIPNGIGIHSNGHVNGAVGPWFNHT 1690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00392 1690 MobiDBLite consensus disorder prediction 1627 1647 - -
Bva10g00392 1690 ProSiteProfiles MATH/TRAF domain profile. 74 204 IPR002083 GO:0005515
Bva10g00392 1690 CDD MATH 414 549 IPR002083 GO:0005515
Bva10g00392 1690 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 60 211 IPR008974 GO:0005515
Bva10g00392 1690 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 404 557 IPR008974 GO:0005515
Bva10g00392 1690 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 241 388 IPR008974 GO:0005515
Bva10g00392 1690 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 574 705 IPR008974 GO:0005515
Bva10g00392 1690 CDD MATH 78 204 IPR002083 GO:0005515
Bva10g00392 1690 Pfam MATH domain 82 206 IPR002083 GO:0005515
Bva10g00392 1690 Pfam MATH domain 445 551 IPR002083 GO:0005515
Bva10g00392 1690 Pfam MATH domain 592 699 IPR002083 GO:0005515
Bva10g00392 1690 SUPERFAMILY TRAF domain-like 414 555 - -
Bva10g00392 1690 MobiDBLite consensus disorder prediction 942 958 - -
Bva10g00392 1690 SUPERFAMILY TRAF domain-like 243 388 - -
Bva10g00392 1690 MobiDBLite consensus disorder prediction 935 959 - -
Bva10g00392 1690 ProSiteProfiles MATH/TRAF domain profile. 413 549 IPR002083 GO:0005515
Bva10g00392 1690 PANTHER TRAF-LIKE FAMILY PROTEIN 39 1690 - -
Bva10g00392 1690 SUPERFAMILY TRAF domain-like 579 704 - -
Bva10g00392 1690 SUPERFAMILY TRAF domain-like 74 212 - -
Bva10g00392 1690 CDD MATH 581 703 IPR002083 GO:0005515
Bva10g00392 1690 ProSiteProfiles MATH/TRAF domain profile. 245 382 IPR002083 GO:0005515
Bva10g00392 1690 Gene3D - 1447 1640 - -
Bva10g00392 1690 PANTHER TRAF-LIKE FAMILY PROTEIN 39 1690 - -
Bva10g00392 1690 Coils Coil 1417 1522 - -
Bva10g00392 1690 Coils Coil 1530 1557 - -
Bva10g00392 1690 CDD MATH 246 378 IPR002083 GO:0005515
Bva10g00392 1690 ProSiteProfiles MATH/TRAF domain profile. 579 703 IPR002083 GO:0005515
Bva10g00392 1690 SMART math_3 250 363 IPR002083 GO:0005515
Bva10g00392 1690 SMART math_3 76 184 IPR002083 GO:0005515
Bva10g00392 1690 SMART math_3 584 684 IPR002083 GO:0005515
Bva10g00392 1690 SMART math_3 418 530 IPR002083 GO:0005515
Bva10g00392 1690 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00392 Bva-Chr10 4319274 4327279 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00392 - - ccaj:109798115 2937.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00392 10 4319274 4327279 Bva10g00392 10 4319274 4327279 ECH