Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00389 ATGCAGAGACGGAGTCCTCCCAAGCACAGGCACGATGGGACTTCGCCGCTGCCGCTGGGGATGGATTGGAGTCCTCCACCACGAAAATGGAATGGGCGGGACACTGTTTGGCCACACAATCACCAAACAGGTTGGAGTTATTGTGTGACAATACCTTCTTGGATCTTCCTTCCAAAATCAAGGAACTCAGATCCCATTGCGTTCTACAGGGTTCAAGTGGGTGTACAATCACCAGAGGGGATAACAACAATCCATGGAGTGCTTAGACGATTCAATGATTTTCTAAAGTTGTTTGCTGATATTAAAAGGGAGTTTCCCAGGAAAAGTGTTCCTCCAGCACCACCCAAGGGACTGGTGCGATTGAAAAGCCGAGCACTATTGGAAGAGAGAAGGTGCTCCTTGGAGGAATGGATCAATGAGCTGTTGTCTGATATTGATATATCAAGATGTGCTGCACTAGCATCGTTTCTTGAACTAGAAGCTGCTGCTAGGTCTTCCTTCCAAGATGCAAGTCAGCAAAATTCAGAAACAGATCCTGCTTCCAATAGCACAGCTTATTCTGGACAATCACTTTCCCGCCCAAGCTTATCATTAGTTGCTGGCAGTTCATCTGTTGCATCAGATTATGGTAGTGATACTGCATACTCACCATCTGAACTTGGAACACCAACGGTTGGACTGGATGATCATTCTGAGACTGGCACAGATTATCTAACATTAGATGATGATATGACAAATCCAATCGAAAAGCTTGCGAAGTTTGGCATATCTAATATTGATGAGGGATTAATTATGGGTCAGACTATTCTAGAGCAATTAGAGGGCCTTCCTAGGCATAAAGTGGGTGCCAGACATATCAACAATGTCGTAGAGAAGAACAAACATAATGGAAATTCTTATAGTGCTTCACTTTTAGCCAATAATTCTATGGAGCTTTTCTCTGAGCATGAACATGCTAAGGTTATTGGTCATGTTCGTAAGGTTTCAAATGATAGTGTAGGAAGTGATGGAAGCTCTTTTCGAGGCAGTGACCTGTCTAATTATGGGATTCCAAATTCATCTGGTGATGGCTATCTTGACCTTCCTGGAGGTGTTGAGGTGTCAAGAACTGCAGATATTGCAGGACATGCAGAGTTTCGATCTACTGGTGATGCTCAAGTAGTCCTTCCACTGGATCAACGCCATAAATTGAATCGGATTCTTCTAACCATGCAGCGAAGGCTAGCCACTGCAAAAACTGATATGGAGGACCTCATAGTTAGGTTAAATCAAGAAATAGCAGCAAAGGATTTCCTTGCAACAAAGGTCAAGGATTTGGAAGTAGACCTTGAAgctaccaaaaagaaaagtaaagagaaCCTGCAGCAGGCCATTTTGCTTGAGAAGGAAAGGTTTACCCAAATGCAATGGGATATGGAGGAACTTCGGCAGAAGTCATTGGAAATGCAGATGAAACTAAAGTCCGAATCGGGTGGAAATCTGACAAACGAATCGAGTGTTCAAAAGCAAGATATACTGTTGCAGAATTTAAATGCTACTAAAGAGCAGCTAGAAACTTTGAAAAAGGAGTATGAAGAGTTAGAAGCAAAATCCAAAGCAGATGTCAAAGTCCTTGTTAAAGAGGTTAAATCTCTCCGAAATTCCCAGATAGAATTGAAAAAGGAGCTCAGTCAGtcaagaaaagagaagtgTGAAGCTGAGaaaattcttcaacatgaaagagagaagagagagcaTACAGAAATCGCTTGGAGGAAGCTGCTGCAGAAATGCAGGCTTCTTTTCAACCAGCTTCAAGAATGCAACGCTAATCTTCCAACCGAAGATAAAGATAACGCCGTGATGAATTCGTCATCATCAACAGATGCTTTGAATCAATTAACAATATCTAATGACCGAATTGGCCTCCTTCTAGCCGAGGTAAAAGACTTAGGGCCGGACGATGGAAGCGCCGCTTCCGATGTAGATAATTTCAATGGTGATGAATTGAGAAAGATCATAGTCGATTTGTTGGTTGAGAATGCTACAATGAGAAAACAGATAAACTGTGTCACAAGACATACTCTCAAATTGGACGTCATGTCAGCAAGTGACTCAACAGAAAATACAGCGAGTCTTTA 2120 0.4108 MQRRSPPKHRHDGTSPLPLGMDWSPPPRKWNGRDTVWPHNHQTGWSYCVTIPSWIFLPKSRNSDPIAFYRVQVGVQSPEGITTIHGVLRRFNDFLKLFADIKREFPRKSVPPAPPKGLVRLKSRALLEERRCSLEEWINELLSDIDISRCAALASFLELEAAARSSFQDASQQNSETDPASNSTAYSGQSLSRPSLSLVAGSSSVASDYGSDTAYSPSELGTPTVGLDDHSETGTDYLTLDDDMTNPIEKLAKFGISNIDEGLIMGQTILEQLEGLPRHKVGARHINNVVEKNKHNGNSYSASLLANNSMELFSEHEHAKVIGHVRKVSNDSVGSDGSSFRGSDLSNYGIPNSSGDGYLDLPGGVEVSRTADIAGHAEFRSTGDAQVVLPLDQRHKLNRILLTMQRRLATAKTDMEDLIVRLNQEIAAKDFLATKVKDLEVDLEATKKKSKENLQQAILLEKERFTQMQWDMEELRQKSLEMQMKLKSESGGNLTNESSVQKQDILLQNLNATKEQLETLKKEYEELEAKSKADVKVLVKEVKSLRNSQIELKKELSQSRKEKCEAEKILQHEREKREHTEIAWRKLLQKCRLLFNQLQECNANLPTEDKDNAVMNSSSSTDALNQLTISNDRIGLLLAEVKDLGPDDGSAASDVDNFNGDELRKIIVDLLVENATMRKQINCVTRHTLKLDVMSASDSTENTASL 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00389 706 Pfam PX domain 87 158 IPR001683 GO:0035091
Bva10g00389 706 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 700 - -
Bva10g00389 706 SUPERFAMILY PX domain 40 160 IPR036871 GO:0035091
Bva10g00389 706 Gene3D - 48 185 IPR036871 GO:0035091
Bva10g00389 706 Coils Coil 500 537 - -
Bva10g00389 706 Coils Coil 429 456 - -
Bva10g00389 706 ProSiteProfiles PX domain profile. 47 164 IPR001683 GO:0035091
Bva10g00389 706 MobiDBLite consensus disorder prediction 210 233 - -
Bva10g00389 706 MobiDBLite consensus disorder prediction 168 190 - -
Bva10g00389 706 Coils Coil 542 562 - -
Bva10g00389 706 MobiDBLite consensus disorder prediction 1 26 - -
Bva10g00389 706 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 700 IPR044588 GO:0015031
Bva10g00389 706 SMART PX_2 55 160 IPR001683 GO:0035091
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00389 Bva-Chr10 4302074 4307420 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00389 - - gmx:100792151 1029.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00389 10 4302074 4307420 Bva10g00389 10 4302074 4307420 ECH
Bva10g00389 10 4302074 4307420 Bva06g02383 06 15352824 15358313 ECH