Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00371 ATGGAGCTAGAAGGAGGTCGAAAAAGTACTGTGGTTACTCAGATAAGCATTGGTGGGTTTGACCGTCAGGTCAAAGCAAAGGATCTTGCGACATACTTGGAAGACGAGATTGGGCTAGTGTACAGGTGTCGGCTGAAAACCTCTTGTACCCCTCCTGAGTCCTATCCAGATTTTGAGATTAGTGACACTGCTGAGGTTGAAAGAACAGATGACTACAAGAAGGTGGAGCCTCATGCATTTGTTCATTTTGCGTTGGTTGAATCTGCAACTGAGGCTTTTAATGCAGCTGGCCGCTGTGAACTATTCTTGAACAATCAGGCTTTAAAGGTTAGCCTGGGGCCTGAAAATCCACACTCCTTAAACCAAAGAAGGAGAACTACAACTCCATATAAATTATCTGATGCAATTGTTGAAATTGGGGCTTTAGTTGGCCCAGAGGATTTTTTGGTTGCTTGGAGAGGACCTGATAAAGGGGTTAACTTTCTGGTGGATCCTTTTGATGGCATGTGCAAATTCTGTTTCTCTAGAGATActgctttctcttttaaaaatatggaaCAAAAAGCAGTGATGAAGTGTGATTTTCAGGTTGGATTCTTGGTTAGAGACATAAATGAGATAAGGCAATATGATGATGCGTCATATCTAGTTATTCTGTTACAGCTGGCTTCATCGCCTTGGGTCTGGTATAGAACTGCTGATGATGACATTGAAGAGTCAGTTCCATTTGATCTGTTGGACGATGATGATCCTTGGATCAGAACCACTGATTTTACACCAAGTGGAGCCATTGGGCGATGCAATTCTTATAGAATTTCAATCCCACCTCGTCATGGTGCAAAACTGATGAACGCCCTCAATTATCTGAAAAGTCAGAGAGTGCAGAACATTTCACATAAAAGGCCAATCAGGATACAAAATGAACCTGATTATGGTATACCCATGATAGATCCTTTCTTCTGTGTTCATTTCCATGAAGGAATCCCCTTTGATCTCATGTTCTTGGTGAATGCTATAGTACACAAAGGAATATTCAATCAACACAGGCTGACAGATAGTTTTTTTGAATTGCTGAGGAATCAACCTAAGGAGGTCAATGTGGCTGCACTGAAGCACTTATGCTCTTACAGTCGCCCAGTGTTTGATGCAGTTAAGAGGCTAAGAACAGTTCAAGAATGGTTGCTGAGAAATCCTAAGCTTTACCAGATTTCTAAACAGTCAGATGATATTATGGAGGTTAGAAGATTGGTCATCACTCCAACCAAGGCTTACTGCATTCCTCCAGAAGTTGAAATGTCCAATAGGGTTCTCaggaaatataaagaatttgcAGATCGTTTCTTGAGGGTAACCTTTATGGATGAAGGCATGCAAACAATCAATGCAAGTGGTCTTAACTATTATGTTGCTCCTATAGTGAAGGAAATCACATCTAACTCCTTCTCGcagaagacaaaaatatacAGAAGGATAAAGACCATCCTAGAACGAGGCTTTCATCTATGCGGCAGAAAATATTCGTTTTTGGCCTTCTCATCTAATCAACTAAGAGATCGTTCTGCTTGGTTTTTTGCCGAGGATAGGAAGATGAACATGACCTGTGACAATATAAGACGTTGGATGGGTAAGTTTGATCAAAAGAATGTTGCAAAATGTGCTGCAAGAATGGGGCAATGCTTCTCATCTACATATGCAACCGTGGAGGTTCCACATAATGAGTTTAAACCCATACCCGATGTTGAGAGGAATAATTATACTTTCTCTGATGGGATTGGCATAATTACTCCTGATCTTGCAGCTGAAGTtgcaaataaattgaaattggaGAATCCACCAAGTGCTTATCAGATTAGATATGCTGGTTTTAAAGGGGTTGTGGCATGTTGGCCAGCCAAAGGCAGTGGGTTTCGACTATTTCTGAGGCCTAGCATGGACAAATTTCAGTCCTCCCATACTACCTTGGAGATTTGTGCTTGGACCAGGTTTCAGCCTGGTTCTCTTAATAGGCAGATTGTGACATTGCTTTCAGCTTTGGACGTACCTGTTGACGTATTTTGGAGAATGCAAGAGGTGATGGTTTCTAATTTGAATCAAATGCCTGTGGATGCAGATGTGGCTTTTGATGTTCTCACCAGATCTTGTGCTGAGCATGGAAATTCTGCAGCAATAATGTTAAGTGCCGGCTTCAATCCTCAACTTGAACCCCATCTTAGAGGCATTTTGACCTCTGTACGTGCTGCCCAACTTTGGGGCCTAAGAGAGAAAGCCAAGATATTTGTTCCATCTGGTCGGTGGCTGATGGGCGTATTTGATGAACTGGGCGTGCTTGAACAAGGGCAGTGCTTTGTCCAAGTATCTACTCCATCtctagaaaattatttctcaaagcATGGCTCAAGGTTTAAGGAGACAAAGAACTTGCAAGTAGTTAAAGGCTTTGTGGTAATTGCAAAGAATCCATGTCTTCACCCAGGAGATGTAAGAATCTTGGAAGCTGTCGATGCTCCTGATTTGCATCATTTATATGATTGTGTTGTTTTCCCACAGAAGGGTGATAGACCTCACACAAATGAAGCTTCTGGAAGTGACCTTGACGGGGACCTTTATTTCGTCACGTGGGATGAAAATCTGATTCCACCTGGTAAGAAGAGCTGTGTGCCAATGCAGTATGCTTCTTCAGATAGCAAACTTCAGACACGTCAAGTCACTACTCGGGACATTACAGActtttttgtgaaaaacaTGATAAACGAGAATTTGGGTGCAATCTGCAATGCACACGTGGTGCATGCTGATCTCAGCGACTATGGTGCGATGGATGAAAATTGCATAACCCTGGCTGAGTTAGCTGCCACAGCTGTTGATTTCCCGAAGACTGGGAAGCTTGTCACTATGCCTTCTCGTCTGAAACCAAAACTATACCCTGATTTTATGGGGAAAGAGCCGCACCAGACATACAAGTCCAAGAAAGTCCTCGGTAGACTTTACCGGCGGATCAAAGATGCTTATGATGAAGATATCGAGGCTACGGGTTCTAATTATGCGACAGGCGATCCCCCTTATGACACTGATCTTGAGTTGCTAGGGTCTGCTGATTTTATTACTGATGCATGGAAGCAGAAGTGCTCGTATGATGGTCAGTTAAATGCCCTGCTAGGTCAGTACAaagtgaaaagagaagaagaagtcgTTACtggacagatttggtccatgccCAAGTACAACAGCAGGAAGCAAGGGGAGCTTAAGGAGAGGCTCAAGCATTCTTACAGTGCCCTGAAGAAAGAATTCAGGCAAACTTTCGAGAACTTGAACTCCGATGCACAAGAATTAagtgatgaagaaaaaaatttgttgtatGAACAGAAGGCGTCAGCCTGGTACCAAGTCACATATCATCCGAAATGGGTGAAGAAGTCCCGGGATCTTCAAGATAGATCCCCAGAGAATCAAGAGCCAGGTGATCCTGGAAATACCGTGATGCTGAGTTTTCCTTGGATTGCAGTTGATTACCTGGCTCGCATTAAGATAAAGCGTCGGGGATATGGAAACGTGGATTCAACTAAGCCAGTTGATTCTCTGGCAAAGTACCTAGCTGAAAGGTTATG 3608 0.4105 MELEGGRKSTVVTQISIGGFDRQVKAKDLATYLEDEIGLVYRCRLKTSCTPPESYPDFEISDTAEVERTDDYKKVEPHAFVHFALVESATEAFNAAGRCELFLNNQALKVSLGPENPHSLNQRRRTTTPYKLSDAIVEIGALVGPEDFLVAWRGPDKGVNFLVDPFDGMCKFCFSRDTAFSFKNMEQKAVMKCDFQVGFLVRDINEIRQYDDASYLVILLQLASSPWVWYRTADDDIEESVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRISIPPRHGAKLMNALNYLKSQRVQNISHKRPIRIQNEPDYGIPMIDPFFCVHFHEGIPFDLMFLVNAIVHKGIFNQHRLTDSFFELLRNQPKEVNVAALKHLCSYSRPVFDAVKRLRTVQEWLLRNPKLYQISKQSDDIMEVRRLVITPTKAYCIPPEVEMSNRVLRKYKEFADRFLRVTFMDEGMQTINASGLNYYVAPIVKEITSNSFSQKTKIYRRIKTILERGFHLCGRKYSFLAFSSNQLRDRSAWFFAEDRKMNMTCDNIRRWMGKFDQKNVAKCAARMGQCFSSTYATVEVPHNEFKPIPDVERNNYTFSDGIGIITPDLAAEVANKLKLENPPSAYQIRYAGFKGVVACWPAKGSGFRLFLRPSMDKFQSSHTTLEICAWTRFQPGSLNRQIVTLLSALDVPVDVFWRMQEVMVSNLNQMPVDADVAFDVLTRSCAEHGNSAAIMLSAGFNPQLEPHLRGILTSVRAAQLWGLREKAKIFVPSGRWLMGVFDELGVLEQGQCFVQVSTPSLENYFSKHGSRFKETKNLQVVKGFVVIAKNPCLHPGDVRILEAVDAPDLHHLYDCVVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPGKKSCVPMQYASSDSKLQTRQVTTRDITDFFVKNMINENLGAICNAHVVHADLSDYGAMDENCITLAELAATAVDFPKTGKLVTMPSRLKPKLYPDFMGKEPHQTYKSKKVLGRLYRRIKDAYDEDIEATGSNYATGDPPYDTDLELLGSADFITDAWKQKCSYDGQLNALLGQYKVKREEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRQTFENLNSDAQELSDEEKNLLYEQKASAWYQVTYHPKWVKKSRDLQDRSPENQEPGDPGNTVMLSFPWIAVDYLARIKIKRRGYGNVDSTKPVDSLAKYLAERL 1202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00371 1202 Coils Coil 1094 1121 - -
Bva10g00371 1202 PANTHER RNA-DEPENDENT RNA POLYMERASE 6 8 1201 - -
Bva10g00371 1202 Pfam RNA dependent RNA polymerase 418 999 IPR007855 GO:0003968
Bva10g00371 1202 PANTHER RNA-DEPENDENT RNA POLYMERASE 8 1201 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00371 Bva-Chr10 4206658 4212293 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00371 K11699 - gmx:100795178 1998.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00371 10 4206658 4212293 Bva10g00371 10 4206658 4212293 ECH