Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00362 atggaGGCCACAGCTGGAATGGTGGCTGGCTCGTATAAAAGGAACGAGCTGGTTCGAATTCGCCACGATTCCGAGACTGCGCCCAAGCccttgaagaatttgaatgGCCAAATTTGTCAAATATGTGGAGATACTGTTGGATTAACAGCCACTGGTGATGTCTTTGTTGCTTGCAATGAGTGTGCCTTCCCAGTTTGTCGTCCTTGTTATGAATATGAGCGAAAAGATGGCAATCAGTCTTGTCCCCAGTGCAAGACTAGATACAAGAGGCACAAAGGAAGCCCTCGAGTTGAGggagatgatgatgaagaaggtGTCGATGATCTAGAGAATGAGTTCAATTATGGCCAAGGAATTACCAAGGCAAGGCGGCAGTGGGAAGGAGAAGATGCTGACTTCTCTTCATCCTCTAGACATGATCCTCAACAACCAATTCCCCTTCTCACCAATGGACAGCCgATGTCTGGTGAGATTCCATGTGCTACACCTGACACCCAATCTGTGCGAACCACATCAGGTCCTCTGGGTCCATCAGATAAGGTTCACTCACTTCCTTACATTGATCCAAGGCAACCAGTTCCAGTGAGAATTGTGGATCCATCGAAGGACCTAAATTCTTATGGTCTGGGAAATGTTGACTGGAAAGAAAGGGTTGAAAGTTGGAAACTTAAGCAGGACAAAAATATGATGCAAATGACTGGTAGATACGCTGAAGGGAAGGAAAGCATGGAAGGGACTGGTTCAAATGGAGAAGAACTTCAAATGGTTGATGATGCTCGACAACCTTTAAGCCGTGTGGTGCCAATTCCTTCATCTCACTTGACTCCTTATCGAGTTGTAATCATACTCCGACTTATTATTCTGGGCTTCTTCTTGCAATACCGTTCAACTCACCCTGTGAAAGATGCATACCCCCTATGGCTGACATCAGTTATCTGTGAGATTTGGTTTGCCTTATCTTGGCTCTTGGATCAGTTTCCAAAGTGGTCTCCTATTAATCGTGAGACCTACCTTGACAGGCTTGCTTTAAGATATGACCGGGAAGGAGAGCCATCACAGTTAGCTCCAGTAGATGTTTTTGTTAGTACAGTGGATCCCCTCAAAGAGCCTCCTCTTATAACTGCAAACACTGTATTATCCATACTTGCTGTTGATTACCCTGTGGACAAGGTTTCCTGCTATGTTTCAGATGATGGTTCAGCTATGTTGACCTTTGAAGCCCTTTCTGAAACAGCTGAGTTTGCAAAGAAGTGGGTTCCCTTTTGCAAAAAGCATCATATTGAGCCAAGAGCCCCCGAGTTTTATTTTGCCCAGAAGATAGATTACTTGAAGGATAAGGTCCAACCTTCCTTTGTGAAGGAGCGTCGAGCAATGAAGCGGGAATATGAAGAATTTAAAGTACGGATCAATGCCCTGGTAGCCAAAGCTCAGAAGATGCCAGAGGAAGGTTGGACAATGCAGGATGGTACTCCATGGCCTGGAAATAATCCAAGGGATCATCCTGGAATGATTCAGGTGTTTTTAGGTCATAGTGGAGGATTTGATACAGATGGAAATGAGCTACCTCGACTTGTTTATGTTTCTCGTGAAAAGCGACCAGGCTTCCAGCATCACAAGAAGGCCGGAGCTATGAATGCTTTGATTCGGGTTTCAGCTGTCTTGACCAATGGTGCATATCTTCTGAACGTTGATTGTGATCATTATTTCAATAATAGCAAAGCTCTTAAAGAAGCCATGTGTTTCATGATGGATCCTGCTCTTGGAAAGAAGACATGCTACGTACAATTCCCACAGCGGTTTGATGGCATTGATTGGCACGATCGATATGCCAATCGCAATATCGTGTTCTTTGATATAAACTTGAAGGGGTTGGACGGCATTCAAGGCCCAGTGTATGTGGGAACTGGTTGTTGTTTCAATAGGCAGGCTCTATATGGTTATGATCCTGTTTTGACCGAGGAGGATTTGGAGCCTAACATTATTGTGAAGAGTTGCTGGGGTTccagaaagaaaggaaggggTACCAATAAGAAGTACGTTGACAAAAAGAGGGCAGCAAAAAGAACTGAATCTACCATTCCCATCTTCAACATGGAAGATATAGAGGAGGGTGTTGAAGgATATGATGATGAGAGGTCACTTCTTGTGTCTCAGAAGAGCCTAGAAAAGCGTTTTGGACAGTCCCCAGTTTTTATTGCGGCCACCTTCATGGAGCAGGGTGGCATTCCACCTTCCACTAACCCTGCAACTCTTTTGAAGGAGGCAATCCATGTTATCAGCTGTGGCTATGAAGACAAGACAGAATGGGGCAAAGAGATTGGATGGATCTATGGTTCTGTGACTGAAGATATCTTGACTGGGTTTAAGATGCATGCTCGTGGTTGGATTTCCATCTATTGTATGCCACCCCGTCCTGCATTTAAGGGTTCTGCCCCCATCAATCTTTCTGACCGTCTCAATCAGGTTCTTCGGTGGGCCTTGGgttcaattgaaatttttcttaGTAGGCATTGTCCCTTGTGGTATGGCTACAACGGGAAACTGAAGACGCTGCAGAGGCTGGCTTACATTAATACTATAGTCTACCCGCTTACCTCAATCCCGCTGATTGCTTATTGCATGCTTCCTGCGTTCTGTCTTctcacaaataaatttattattcctGAGATCAGCAACTTCGCTAGCATGTGGTTCATCCTTCTCTTCGTTTCAATTTTTGCTACTTCAATTCTTGAGCTTAGATGGAGTGGGGTGAGTATCGAAGACTGGTGGAGGAATGAACAGTTCTGGGTTATCGGTGGTACATCCGCTCATCTTTTTGCCGTATTCCAAGGGCTACTGAAAGTGCTTGCCGGAATTGATACAAATTTCACTGTCACGTCGAAGGCAGCAGATGAAGATGGGGACTTTGCAGAGCTTTATGTGTTTAAATGGACATCGCTTCTTATCCCTCCTACAACAGTCCTCATAGTGAACTTGGTAGGTATTGTTGCAGGTGTTTCATACGCCATAAACAGTGGCTACCAATCTTGGGGTCCTCTGTTTGGTAAGCTGTTTTTTGCCATATGGGTCATTGCCCATCTGTACCCATTCTTGAAGGGTTTGTTGGGTCGCCAAAATCGTACGCCCACAATTGTTATTGTTTGGTCCATTCTTCTTGCTTCTATATTCTCCTTGCTGTGGGTGAGGATCGATCCTTTCACCACCGACGCCTCAAAAGCTTCTTCCAATGGTCAGTGTGGCATCAACTGCTA 3254 0.437 MEATAGMVAGSYKRNELVRIRHDSETAPKPLKNLNGQICQICGDTVGLTATGDVFVACNECAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPRVEGDDDEEGVDDLENEFNYGQGITKARRQWEGEDADFSSSSRHDPQQPIPLLTNGQPMSGEIPCATPDTQSVRTTSGPLGPSDKVHSLPYIDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVESWKLKQDKNMMQMTGRYAEGKESMEGTGSNGEELQMVDDARQPLSRVVPIPSSHLTPYRVVIILRLIILGFFLQYRSTHPVKDAYPLWLTSVICEIWFALSWLLDQFPKWSPINRETYLDRLALRYDREGEPSQLAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFAKKWVPFCKKHHIEPRAPEFYFAQKIDYLKDKVQPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGFDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPALGKKTCYVQFPQRFDGIDWHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCWGSRKKGRGTNKKYVDKKRAAKRTESTIPIFNMEDIEEGVEGYDDERSLLVSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEIFLSRHCPLWYGYNGKLKTLQRLAYINTIVYPLTSIPLIAYCMLPAFCLLTNKFIIPEISNFASMWFILLFVSIFATSILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKAADEDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFTTDASKASSNGQCGINC 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00362 1084 Coils Coil 455 475 - -
Bva10g00362 1084 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Bva10g00362 1084 MobiDBLite consensus disorder prediction 127 152 - -
Bva10g00362 1084 CDD mRING-HC-C4C4_CesA_plant 37 87 - -
Bva10g00362 1084 Pfam Zinc-binding RING-finger 29 105 IPR027934 -
Bva10g00362 1084 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 19 1084 - -
Bva10g00362 1084 Pfam Cellulose synthase 357 1075 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bva10g00362 1084 PANTHER CELLULOSE SYNTHASE 19 1084 - -
Bva10g00362 1084 MobiDBLite consensus disorder prediction 137 152 - -
Bva10g00362 1084 SUPERFAMILY RING/U-box 22 111 - -
Bva10g00362 1084 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 112 IPR013083 -
Bva10g00362 1084 SUPERFAMILY Nucleotide-diphospho-sugar transferases 375 657 IPR029044 -
Bva10g00362 1084 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 516 658 IPR029044 -
Bva10g00362 1084 MobiDBLite consensus disorder prediction 164 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00362 Bva-Chr10 4171938 4178943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00362 1 1082 Glycosyltransferase AT4G32410 86.267 0.0 1913
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00362 K10999 - mnt:21389087 2098.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00362 10 4171938 4178943 Bva10g00362 10 4171938 4178943 ECH