Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00340 ATGTTGGGTTGGGCTAATTTGGATTCAGAAGTTTGGGCGCAGCCCAATGAGGCCCACCGTACTGGAGTGTTCGCCAACGTTCCTACTCCCACCTCCTCGGCGCGCTGTCGTTGCTCCTGTCGCTGTTCTCAGACTGGCTCTCCTACAATGAAACGTGCTTCTTCTCCCATCCATCGGCTCACCGCTGCTTCCGACGCCACCACCTTCGTTATGGCTTCGCGTCCGACTTACCGAGGTCGAGGTCGTGGGAGAGGATCCTCTGCCCGTCCGTACTCTGGCGGAAGAGGACAGTTCGTTAGTGGAGACGCGCACTTCCGCTCAGTTCGTGACGCCAATTTAGGATTCCGGCAAGTGGACAGTGGAAGCTTTCCGAACCAAACACGGTACCAGAATCCACCTTTCAACCCGAGACCTCCCCCGCCGTACCACCAAAACCCTCAGTTTCGTCACCCTCATCCGTTCAATCAACCTCATCGATTTCGGCCTCCTCCATCGTTTGATCAAAAACCAGCAATTTGTCCACGTCAGCATTATCGGCCGCGGCCTCCAGATTATCGAGATTGGGAGTATGCTACCACGCCACCTGATCCTGATTGCgAGCGGTTCGTAGttctttcatataatatattggcTGACTACCTTGCTATTGATCACCGGGGCAAACTCTACTACCACATACCTCTCTACATGTTGGACTGGCAgtggagaaagagaaatttactCTTTGAGCTTGGATTGTGGTCTGCTGACATCATGTGTTTACAGGAGGTTGATAGATTTCATGATTTAGAGGAGGAGTTCAAGCTTAAGGGCTACAGTGGCATCTGGAAGATGCGTACGGGCAATCCAGTTGATGGCTGTTCAATCTTTTGGCGAACATCAAGGTTCAAATTGCTACATGAAGAATGCATTGAGTTTAATAAGCTGGGACTCAGGGATAATGTTGCTCAGATATGCGTTCTAGAGTTAATTAATCAGAAAGGAGCTCTACCATCAAGTTTAACAGGCTCTTGTAAAGTTGTCGTTTGTAACATTCATGTGCTTTACAATCCCAATAGAGGAGAAATTAAGCTTGGTCAGGTCAGAGTTCTCCTGGAAAGGGCTAAAGCTGTTTCAAAATCCTGGAATGACGCTCCTGTTGTTATCTGTGGGGATTTCAATTGTACCCCAaagAGTCCATTATACAATTTCATCTCAGAACAGaagTTATATTTGTCTGGAGTGGAGAGAAATAAGGTATCAGGACAAGCTTCTGCTGTAATTGGCCCACCAAGGCAGTATCGTCCTAATCCTAGTGAAATGCCAGCTCATGGTTCAGTTAAAGGCTCTTCTATTGTGGGTGACAAGGAAGTTAATATTGAACCAAGTAATTGTTTATCAGACATGCTGAATCGGAGCAATCAAGAGAACAATACGGATAATCAACAGACTGGCATTGTGTTGGACGTTATGTCTGATAAGTCTTTGACAAATGAACAACATGGAAAGGACACTCACCTGAATGCTGTAGACTATGCTAAGAATTTGGGTGAAGTTGATAGCTTAAAGGAAGACTCTCATGCATCCGATAGTGAAGGTAGGTTCCCTGTTGAACATACAAGCGATGAGATTCATGATAATACACCTATCGCATCTTCTGCTCCTGAAGTAGTTCACACTAATGCGATTGGGATGGGGTGTGCTGAACAAGTATCAGATGCTGTACCTCCATCAActcacaaaatattaaatgaaacatCCAACTTGTATGTCcccaatgaaaatgaaagtatgAAGTTTGACAGTTCTCCTACCTCCCTTCAGGAAGACAATCAATCCTCCAGGATAAAGATAGCTTCTGAGTCAACTGGTCCCTTGAGTCTAGAAACTTCTTTAACTGAGTCATCGAGCCAGAATTCACTTTCTAATGTTATAGAAGTCGCTCATCCAGGAAATGGGGAAAGTCTGTTATGTGAACTTCTTGCTAATGATCAAGTAAACAGCTCCTCAACCTCATATCAAGTTGACGAATCACCTCAATTGGCCAACGTTGACTTTCCACTGGATGAGAAACTACAAAACTTGCCCCTTGATGAGATAGATAAAACCATGATTGGCtgtgaaaatattgaagatgCCGATGATTTCATATCTGCACTACACAATGGTGAAGAAGGCTTCTCTCAAGGTCTTGAAAACTCAGATCAGTTTGAACTAGAATCTGCCTCCTTCAACACACCGTTGCAACAACAAAGTGATGAAATGGAGGATGACTTACCCCCAATACGGAATACTATTGATGTGGGGAGATCATTGTGGACCCCCATGGAGATAGAAACTGCAACCGGCAATGCAGAGTGCACCGTTTTGGAACACCAGCTACCGCTGAGGAGCACATATACTGAAGTCACGGATTGTTCGGGGACTAGGGACTCCAATGGAGAGCCCCTGGTGACCAGTTATAATAGGTGTTTCTCAGGGACTGTTGATTACATTTGGCGATCCGAAGGTCTCCAGACAATCAGGGTGCTTGCTCCAATACCCAAACATGCTATGGAATGGACTCCAGGATTCCCAACAAAGAAATGGGGAAGTGATCATATTGCCTTGGTTTCTGAATTGGCGTTCTTGAAAGATGTCACCCATGGCAGGGACGTTCAATA 2642 0.4417 MLGWANLDSEVWAQPNEAHRTGVFANVPTPTSSARCRCSCRCSQTGSPTMKRASSPIHRLTAASDATTFVMASRPTYRGRGRGRGSSARPYSGGRGQFVSGDAHFRSVRDANLGFRQVDSGSFPNQTRYQNPPFNPRPPPPYHQNPQFRHPHPFNQPHRFRPPPSFDQKPAICPRQHYRPRPPDYRDWEYATTPPDPDCERFVVLSYNILADYLAIDHRGKLYYHIPLYMLDWQWRKRNLLFELGLWSADIMCLQEVDRFHDLEEEFKLKGYSGIWKMRTGNPVDGCSIFWRTSRFKLLHEECIEFNKLGLRDNVAQICVLELINQKGALPSSLTGSCKVVVCNIHVLYNPNRGEIKLGQVRVLLERAKAVSKSWNDAPVVICGDFNCTPKSPLYNFISEQKLYLSGVERNKVSGQASAVIGPPRQYRPNPSEMPAHGSVKGSSIVGDKEVNIEPSNCLSDMLNRSNQENNTDNQQTGIVLDVMSDKSLTNEQHGKDTHLNAVDYAKNLGEVDSLKEDSHASDSEGRFPVEHTSDEIHDNTPIASSAPEVVHTNAIGMGCAEQVSDAVPPSTHKILNETSNLYVPNENESMKFDSSPTSLQEDNQSSRIKIASESTGPLSLETSLTESSSQNSLSNVIEVAHPGNGESLLCELLANDQVNSSSTSYQVDESPQLANVDFPLDEKLQNLPLDEIDKTMIGCENIEDADDFISALHNGEEGFSQGLENSDQFELESASFNTPLQQQSDEMEDDLPPIRNTIDVGRSLWTPMEIETATGNAECTVLEHQLPLRSTYTEVTDCSGTRDSNGEPLVTSYNRCFSGTVDYIWRSEGLQTIRVLAPIPKHAMEWTPGFPTKKWGSDHIALVSELAFLKDVTHGRDVQ 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00340 880 Pfam Endonuclease/Exonuclease/phosphatase family 205 408 IPR005135 GO:0003824
Bva10g00340 880 MobiDBLite consensus disorder prediction 76 97 - -
Bva10g00340 880 MobiDBLite consensus disorder prediction 585 607 - -
Bva10g00340 880 MobiDBLite consensus disorder prediction 116 180 - -
Bva10g00340 880 MobiDBLite consensus disorder prediction 420 447 - -
Bva10g00340 880 SUPERFAMILY DNase I-like 190 403 IPR036691 -
Bva10g00340 880 Gene3D Endonuclease/exonuclease/phosphatase 707 877 IPR036691 -
Bva10g00340 880 Gene3D Endonuclease/exonuclease/phosphatase 175 499 IPR036691 -
Bva10g00340 880 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 84 871 - -
Bva10g00340 880 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 6 84 871 - -
Bva10g00340 880 MobiDBLite consensus disorder prediction 131 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00340 Bva-Chr10 4058799 4067251 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00340 271 401 EF-hand Containing Proteins AT1G02270 28.777 1.92e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00340 - - gmx:100810446 915.605