Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00332 ATGGGTTCATGCAAAGAAAAGGAGCGAGAGCAAGCAAAGTGTGTATGGGTTCATGGGCCTATCATTGTAGGTGCTGGACCCTCTGGTTTAGCAGTTGCAGCTTGCCTTTCTGAACATGGAGTACCTTCTGTGATTCTTGAGAGAAGTGAATGTATAGCCTCTCTGTGGCAACATAGAACCTACGACCGTCTCAAGCTTCACCTTCCCAAACAGTTCTGTGAGCTTCCATTAATGGGTTTCCCTAGCAATTTCCCAAAGTACCCCACCAAGCATCAGTTCATCTCCTACTTGGAGtcctatgcttcacatttctCAATTCAACCCAGGTTTAACCAAACAGTTCAAATTGCAGACTTTGATCCAAGCTCTGGTTTATGGAATGTTCAAACTCAGGATTTTGAGTACATTTCAAGGTGGCTCATAATTGCCACTGGCGAGAATGCAGAGCCCTTCATACCTAAAATTACAGGGATGGAAGTGTTTCAAGGATCCATTGCTCATACAAGCGTCTATAAATCGGGTTCTGATTACAAAGGCCAGAGAGTTTTGGTCGTTGGCTGTGGCAATTCAGGCATGGAAGTTAGCTTGGATCTTTGTAGGCACAATGCAATCCCTCACATGGTTGCTCGAAACACCGTACATGTTCTGCCAAGAGAAATATTTGGCTTCTCAACATTCGGAATAGCTATGGCACTGTCTAAATGGTTTCCTTTAAGATTAGTGGACAAGTTCCTCTTGCTAATGAGTAGTTATATCTTGGGCAACACGGATCAGTACGGTCTCCGGCGACCAAAGACAGGCCCCATTGAGCTCAAAAACGCCACCGGAAAGACCCCTGTTCTTGATGTTGGGGCAATGGCTCAGATAAAATCTGGAAAAATAAAgGTAATGGAAGGTGTGAAAGAGATAACTAGAAATGGAGCCAAGTTTATGGATGGACAAGAAAAGGAGTTTGATTCTATAATCCTAGCTACAGGGTACAGAAGCAACGTGCCAACTTGGCTCAAgAGCTGCGATTTTTTCACAAAAGATGGAATGCCGAAAATGCCCTTTCCAAACGGTTGGAAGGGAGAGAATGGATTGTACACGGTGGGTTTCACCAGAAGGGGTCTCCTTGGAACAGCCTCTGATGCATCCAACATTGCCCAAGACATTGCTGGCGAGTGGTTGACCATTAAGGAAAGCAAGAATTCCCATATTATCCTACTCTA 1211 0.4385 MGSCKEKEREQAKCVWVHGPIIVGAGPSGLAVAACLSEHGVPSVILERSECIASLWQHRTYDRLKLHLPKQFCELPLMGFPSNFPKYPTKHQFISYLESYASHFSIQPRFNQTVQIADFDPSSGLWNVQTQDFEYISRWLIIATGENAEPFIPKITGMEVFQGSIAHTSVYKSGSDYKGQRVLVVGCGNSGMEVSLDLCRHNAIPHMVARNTVHVLPREIFGFSTFGIAMALSKWFPLRLVDKFLLLMSSYILGNTDQYGLRRPKTGPIELKNATGKTPVLDVGAMAQIKSGKIKVMEGVKEITRNGAKFMDGQEKEFDSIILATGYRSNVPTWLKSCDFFTKDGMPKMPFPNGWKGENGLYTVGFTRRGLLGTASDASNIAQDIAGEWLTIKESKNSHIILL 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00332 403 Pfam Flavin-binding monooxygenase-like 22 333 IPR020946 GO:0004499|GO:0050660|GO:0050661
Bva10g00332 403 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED 10 397 - -
Bva10g00332 403 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 168 346 IPR036291 -
Bva10g00332 403 PRINTS FAD-dependent pyridine nucleotide reductase signature 181 199 - -
Bva10g00332 403 PRINTS FAD-dependent pyridine nucleotide reductase signature 20 39 - -
Bva10g00332 403 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Bva10g00332 403 Gene3D - 18 396 IPR036188 -
Bva10g00332 403 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 10 397 - -
Bva10g00332 403 SUPERFAMILY FAD/NAD(P)-binding domain 21 225 IPR036188 -
Bva10g00332 403 PRINTS Pyridine nucleotide disulphide reductase class-II signature 19 41 - -
Bva10g00332 403 PRINTS Pyridine nucleotide disulphide reductase class-II signature 138 146 - -
Bva10g00332 403 PRINTS Pyridine nucleotide disulphide reductase class-II signature 177 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00332 Bva-Chr10 4023756 4025923 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00332 K11816 - zju:107431492 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00332 10 4023756 4025923 Bva06g02434 06 15574673 15577019 BWGD
Bva10g00332 10 4023756 4025923 Bva10g00332 10 4023756 4025923 ECH