Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00310 ATGCCACGAATGGAGGACATTCTAAACCTTCCAGTTCAAGACCCCCCTTGTCCTGAGTTTTCTGCTGCACACATAAACTGGGTAAAAGTAGAAGGTGGCCGCCAAGGTGGAGATGATATTGCTCTGATTCCTTTTGCAAGAGTAGATGATTTTGTAAAAGGAGAATCTTCCAACGCAGAGTGCCCAGCTAACTTTCGCGTTGAATCAAGAAGAAAGAGACCTGAAGGTAGCATCACTAAACCAAGGGTGGATGGCTATCTTGAATACACACTATACTGGTGTTCTTATGGTCCTGAAGACTACCGAGAGAGTGAATCTGGCATAGAGAATGGTGCAAACATCAAACCCGCGTCAGGGAAGGGGAGCAGGCCAGGAAGACGTCACATGATGAGAGGTTGCCTTTGCCATTTCACTgtaaaaagattatataaCCGGCCGCTCATCGCTCTCATCATATATAACCAAAGAAAGCATGTGGATAAAACTGGGGCACCATGTCATGGGATACTTGACAAGGATGCAGTTGGGACAAGAGCAATGTATGCTCCACGAATTTCAGATGAGTTACGCCAGAAAGTGATGGCTATGCTTTATGTCGGAATATCTTTGGATGATATAATACAGCACCACACAGAAGTGATGCAGAAGCAAGGTGGACCCCAAAACCGTGATGATTTCCTCACTCGAAATGATGTGCGTAACATGGAAAGGATTATACGTAATTCTTCACATGAGCTACTGGAAAATGATGAATGCAGTGTAAAGATGTGGGTCCAATGTCATCAGAAGCATGTTTTCTACTTTCAACATAACTCAGGTTCTGTTCCATTTATTTTGGGAATACAGACAGATTGGCAGCTACAACAAATGCTTCATTATGGACATAACAGCTCCATTTCTTTCCATTCAACATTTGGCTCTAAGAAATTTAAGTATCCGCTGTGTTCTTTACTTGTCTTTGATTCATCCCAAAATGCAATTCCAGTTGCTTGGATCATCACCTCATCTTTTGTCGGTAAAGATATTCATAAATGGATCGGGCTGCTCTCTGAAAGAGTAAAATCCAAGGATCCCAGGTGGAGGCCTAATGCTATTTTCTTGGATGATCTGTCTCTTGACTCTTCTATCATAAGGGAGGCTTTCCAGTGTCGAATCCTGTTATGTGTTTGGCATGTTCGCCGTGCTTGGATAAAAAAGCTTTTGATAAAATGCTGCAATTTCGATGTGCAACGGGAGATGTTTCGGCACTTGGGCTGGATTTTGTATTGTACAAGAAGTGGGCCAAATGCTATGGATGCGGTTGAAGAGTTTATGCAAATATTTGTTGATCAATGTGGCTTCATGGACTACTTCAAGCACCATTGGCTATCAAATCTAGATAAGTGGATTAATGGAATAAAGTCACTCCCCATGGCCCCTCCGGAACCACATGCTGCTATAGAATCCTATCATCTACGACTAAAGTCTAGGCTTTTGAAGGAGCATTGTGCTAATTTCTGGCCAAGAATAGACTGGCTAATCCACACTTTAACTACTGAATTTCACTCCTTATGCTGGCTAGACCAATACAGTTTGGAGACTGGGTACTTTGAGAATCTAAGAGACAATGCTTTCTCCACAAATGCGTGGTATCATGCTCTCCACATTCCAGATGTTGACGTGATATTAGATGAGCAAAATCTCCGCCTTGCAAAAGTCGTATCTCAGACAGATCGAAGCTTGGCATATACAGTCTGGAACCCTGGTTCCGAATTCTCACTTTGTGATTGTCCGTGGTCTAGGCTAGGCAATCTCTGTAAGCATGTCATTAAGGTGGCAACTTTCTGTAGAAGTCGGCAGGTTGCAAGACCATTATTTGCAGCTCAAGTTTATAAGCAAGCTTTGCTTACTCTGCTTCATAATCCTCCAGATGATCCTTTAGTTCTTGACCATACCATTCTACATGTGGCCAGATTGCAACAAGACATTAAAACCCTTGAGGATTTGTCTAACAGTGGATTACTCCAGCCTTTACCTCCTGATTTCAATTGTCAAATGGCTGAAAATTCGCTGCTTTTTCAGCGCCTCCATTG 2072 0.4247 MPRMEDILNLPVQDPPCPEFSAAHINWVKVEGGRQGGDDIALIPFARVDDFVKGESSNAECPANFRVESRRKRPEGSITKPRVDGYLEYTLYWCSYGPEDYRESESGIENGANIKPASGKGSRPGRRHMMRGCLCHFTVKRLYNRPLIALIIYNQRKHVDKTGAPCHGILDKDAVGTRAMYAPRISDELRQKVMAMLYVGISLDDIIQHHTEVMQKQGGPQNRDDFLTRNDVRNMERIIRNSSHELLENDECSVKMWVQCHQKHVFYFQHNSGSVPFILGIQTDWQLQQMLHYGHNSSISFHSTFGSKKFKYPLCSLLVFDSSQNAIPVAWIITSSFVGKDIHKWIGLLSERVKSKDPRWRPNAIFLDDLSLDSSIIREAFQCRILLCVWHVRRAWIKKLLIKCCNFDVQREMFRHLGWILYCTRSGPNAMDAVEEFMQIFVDQCGFMDYFKHHWLSNLDKWINGIKSLPMAPPEPHAAIESYHLRLKSRLLKEHCANFWPRIDWLIHTLTTEFHSLCWLDQYSLETGYFENLRDNAFSTNAWYHALHIPDVDVILDEQNLRLAKVVSQTDRSLAYTVWNPGSEFSLCDCPWSRLGNLCKHVIKVATFCRSRQVARPLFAAQVYKQALLTLLHNPPDDPLVLDHTILHVARLQQDIKTLEDLSNSGLLQPLPPDFNCQMAENSLLFQRLH 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00310 690 ProSiteProfiles Zinc finger SWIM-type profile. 576 610 IPR007527 GO:0008270
Bva10g00310 690 MobiDBLite consensus disorder prediction 105 125 - -
Bva10g00310 690 PANTHER ZINC ION BINDING PROTEIN 1 689 - -
Bva10g00310 690 PANTHER ZINC ION-BINDING PROTEIN 1 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00310 Bva-Chr10 3882157 3891933 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00310 - - gmx:100779025 1244.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00310 10 3882157 3891933 Bva10g00310 10 3882157 3891933 ECH