Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00297 ATGGACCCCAAATTATTAATGTCCACCAAAAACCAACTAAGATCTCATGACAGTGCTTGGGATGGACCCCAAATACTCACAGAATCGAAGATACAACAGTACTTGGGCATACCTCAATCCAAAAGATCGACGATCCTTCgaagtttctttcttcattttcagGGAGTAGAAGAGATGGTTGATGACAAAGAAGTTGGGGGAGGTGAAAAGAAAGACACAGGTCCTAGTACTACTGGCAATGAGAAGAAGAAACGACCGGGAATTATTTCCAGAATTTGGAATGGACTGTTTAGATTACATGGTGATGATTTTGAGAAGAGACTACAATACATATCTAAAGAAGAAGCTTCTGTTCTGTCTAGAATGAGCAGAAGATCCCAATCTTGGAGGCGCACAATCAGacatcttattatattttctgttaTATTTGAGGTCATTGCTGTAGGTTATGCTATTGCAACAACACGATCAATGAATATGAATTGGAAGATGAGGGCAATCAAGGTTTTGCCGATGTTTCTTTTGCCTGCCTTATCATCTGCTGCTTATTCAACATTTGTCAGCTTCACTAGGATGTGTGATCGTAGGGACCAGAAAATTCTTGAAAGGCTTCGAGCTGAAAGGCAAGCAAAAATTGATGAGCtaaaagagaagacaaatTATTACATCACTCAACAGCTCATTCAGAGATATGACCCTGACCCAGCAGCTAAGGCAGCTGCTGCAACAGTCCTGGCATCCAAGCTGGGTGCCGATTCTGGCTTGAAAGTGTATGTGGGAGATGAATCCAGTCTTGGTGCTCCAACAACAGGGAAGAGCCATGACGTTGAACTTGTGCAATCAAGTGGACTTAGAAATCGCAAACAAGTCCGCTCTAGGTCTAGTAGTCCAGGGGCAATTACACCTGATCATTCTGATCAGCAATCAGTTAGTTCTGGGGGAACTGAGCAAACTCAGATTTCCGAGCTTAATCAGCCTGTAGTTGTTGAACATCACCAACCTCAAAGTTCATCCACACAGGATGAAGGTTGGATTGCTCGAATTGCAGCTTTGCTTGTAGGTGAGGATCCAACGCAGTCTTATGCACTCATATGCGGCAACTGCCATATGCATAATGGTCTTGCTCGAAAAGAGGATTTCCCATATATCACTTACTATTGCCCTCACTGCCATGCCCTgaacaaaccaaaacaaacCGATGAGCGTGTGTCTGGTTCCATTTCCCCAAATATGGTATCTCCGAAAGCAGACATCGGTGAATCAGTTCAAAATGCCAGCTGTTCTGCAGGCGATAGCCTGAGAGGAACTTCTGTATCTGAAAGGGTTTGGTTGCGTTCTAGAATGAGCAGACCAACTACGcgaagtaaaaataaaagacatagACAAGGGGATGATAGTGCTAACATATCTGAAATATGGAgGAAAATTCACAATACAGGTGTGGTAACTGATGATGATATAAATCAACTTTATATGATTTGGAAGCCTGTCTGTTCAGGCTGCCGGGTCAATGCTAAAGACAACCCAAATTGCTTTTGTGCTTTGGTTCCTCCTCCCAATGGAACCAGAAAGTCGGGCTTATGGCAGAAGATGTCAGATATTCTAGAAAATCTTGGCCCAGATCCATCCAAGGATCTTCGTGCTTCTGTTGATTCTCCTGCAGGTCTGACAAATCTTGGGGCAACATGCTATGCTAACAGTATACTCCAGTGTTTGTACATGAATAAAGCTTTCCGGGAAGGCATATTTTCTGTTGAGCCAGATGTTCTACAACAACAGCCTGTGTTGGATCAGCTGCTTCGTTTGTTTGTGCAGCTGCACATTAGTAAGATGGCTTTTATAGATTCTTCTCCCTTTGTAAAAACTCTGGAGTTAGATAATGGAGTTCAGCAGGATAGCCATGAGTTTCTAACATTGCTTCTGTCATTACTTGAGCGTTGTTTGAGCCATTGCAAAGTTTCCAAGGCAAGAACAATAGTTCAAGATCTTTTCAGGGGAAGTGTTTCTCACGTGACAACGTGCTTGAGATGTGGAAAAGACTCTGAAGCTTCTGCTAAAATGGAAGACTTCTATGAGCTGGAGCTGAACATCAAGGGACTGAAAAGTTTAGATGAGAGTCTAAATGATTACCTCAGCACTGAAGACCTTAATGGGGATAATCAATACTTGTGTGAATCATGTAATACAAGAGTTGATGCTACGCGTAGCATCAAGCTGCGTACATTACCTCCTGTACTCAATTTTCAACTTAAGCGTTGTGTCTTCCTTCCAAAGACtacaacaaagaagaaaattacttCTGCATTTTCCTTTCCCTCTGAACTTGACATGCGGACTAGGTTGTCTGAGCCATCTCAGTTTGAATTGATATATGATTTGTCAGCTGTTCTGATTCACAAGGGAACTGCCGTTAATAGTGGCCATTACATAGCACATATCAAGTATGAAAATAGTGGGCAGTGGTGGGAGTTCGATGATGAGCATGTCACTAACTTAGGTCGTCATCCATTTGGTGAAGGATCTTCAACTTCTACCACCAAATCTGCCAAAAATGATCCAGTCCATTCTGAATCCTCTGAATCAAAGATATCTATCAGCAATGGAAACGGTTCAGACCCCATTCAATCACTATCTTCTCAATCTAGTGCTGTCGGAATTGTTGAGACATTTTCATCTAGTGATGCATACATGCTGATGTATAATCTTAGACGTACTAGAACAAGTGAAAAAGGGAATATGGTGAATGGTGctaatgagaagaaaagagaaagtgatGTAGCTGCTGCACAAGACAGTTTCTCCTTGGTCTCTCatctttttgatgaaattcaaaatatgaatGCCTCGTATCTTGAGGCTTGTAAGAAGTACAATGAAAGTAAAGAGGCAGAGTTGAGTCATATCACTGAGAGGAGACAGGAAGTTCGATCTATTTTATCTGAAGCACCAGTTCAACCACTAGAGAAGccattttatttggtttctaGTGATTGGCTTCGCCAGTGGGCTGAGAATGTTACTCCAACCACTCTTGACAACACAACTATACAATGCTCTCATGGGAAAGTTCCAGTATCAAAGGTTAACCTAATGAAGCGGTTGTCATGCAAAGCATGGGAGATGTTATTATCTAAGTATGGCGGAGGACCCACACTCTCTGATAGTGACTGCTGTTGGGATTGTCTTATTGATGGGGCTCGGTCCGTGGTCTCTGCTGACACCTACAGGGATCGAAGAGAATCAATGAAACAACTTGCACGTGGAATTCTTGATGGAAACTGTCTAGATGGAAAGTATTACATATCCAGACCATGGTTGCAACAATGgtggaaaagaaaagtccTAGATGCTCCATCTGAAGCTGATGCTGGACCAACTGCATCAATTTGTTGTCCACATGGGCAACTTATTCCAGAGCAGGCGACTGGTGCGAAGCGGGTGCTTGTTCCTGAGAATTTTTGGCTCTTCTTATATGAAGATGCTCTTTCTGTAAAACCTGATGATGCATTGGGCTGCCCTACCTTCCCTTCAGATTCCAGTCAGTGTTCTCAATGCAGTGATGAATTATCTGAAGTAGCATGCATGGAGGACTCTTTGAGATTAGTGAAACAAATGCAACGTCAGAATCATGAGAAACTATTCCAGGCTAAAAGTATGCCGTTATTATTGAACTGCAAGTATTTCCTGTTGCCTTCATCTTGGATTTTGAAATGGAGAAACTATGTTAATCCTGCTGTCAAGAATTCAGATAAGCCTGAAGCTTTAGATGGGGTAATTGATTCATTGATGTGTGAAAAGCACTCACTGTTTGTCCAAAAGCCTCCTGAGCTGTTCTACAGACGTGGTGCTATAATCCAGAGAGAGTCTTCTGGCGTTGGCTTAACAATCATATCAGAAAGTGATTGGAAATGCTTCTGTGAAGAGTGGGGTGGTACTGAGGCAAAAGGCATATCTGCAACAATTGAGAATGATAAGGATTCAGAGAATATTTTAGGTGGATCCTCCAAAGAGATGCCAATATCTGAGGATCAGTTGACTGCCTTTGATAAAGGGAATAATGAAGGTGGTACTATACAAATTGTGATTAAGACTTGTCCTGAGGTTTGTGAAAGTTGCATTGGAGAAAGACAGAGCTGTGAGTTGATGCAGAAACTTAACTATTACAATGAGGACATATCTGTCATTCTTGTACGTGGAAAGGAAGTACCTAGATCAATCTTGGAGGCTTCAAAGGGCTCTGTTGAAACAGACCGTCGGGTTTCCAAGCGTTCCCGGAAGACTAAAAATGGGAGTTCCATTAATCTAAAAGTTTCTGCTTCAACATCATTATACCAGCTAAAAATGATGATATGGGAATCCTTTGGGGTTGTCAAGGAAAACCAGATACTGCAGAAAGGTGACAAGACAATTGAAATTGATGATGATAATGCTGTACTCGCAGATTTGAACATATTTGCTGGAGATCAGATTATAGTCAGGGACTCTGAGATCCATGAAAATCGAGATATTGCTGATGAGATTTGTGACGAGAAAATGGACGTGCAGCATACAGAGGAAGGGTTTCGAGGAACACTTTTGACTGCAAATATTTCATCGCAGGTTGTTTA 4607 0.4044 MDPKLLMSTKNQLRSHDSAWDGPQILTESKIQQYLGIPQSKRSTILRSFFLHFQGVEEMVDDKEVGGGEKKDTGPSTTGNEKKKRPGIISRIWNGLFRLHGDDFEKRLQYISKEEASVLSRMSRRSQSWRRTIRHLIIFSVIFEVIAVGYAIATTRSMNMNWKMRAIKVLPMFLLPALSSAAYSTFVSFTRMCDRRDQKILERLRAERQAKIDELKEKTNYYITQQLIQRYDPDPAAKAAAATVLASKLGADSGLKVYVGDESSLGAPTTGKSHDVELVQSSGLRNRKQVRSRSSSPGAITPDHSDQQSVSSGGTEQTQISELNQPVVVEHHQPQSSSTQDEGWIARIAALLVGEDPTQSYALICGNCHMHNGLARKEDFPYITYYCPHCHALNKPKQTDERVSGSISPNMVSPKADIGESVQNASCSAGDSLRGTSVSERVWLRSRMSRPTTRSKNKRHRQGDDSANISEIWRKIHNTGVVTDDDINQLYMIWKPVCSGCRVNAKDNPNCFCALVPPPNGTRKSGLWQKMSDILENLGPDPSKDLRASVDSPAGLTNLGATCYANSILQCLYMNKAFREGIFSVEPDVLQQQPVLDQLLRLFVQLHISKMAFIDSSPFVKTLELDNGVQQDSHEFLTLLLSLLERCLSHCKVSKARTIVQDLFRGSVSHVTTCLRCGKDSEASAKMEDFYELELNIKGLKSLDESLNDYLSTEDLNGDNQYLCESCNTRVDATRSIKLRTLPPVLNFQLKRCVFLPKTTTKKKITSAFSFPSELDMRTRLSEPSQFELIYDLSAVLIHKGTAVNSGHYIAHIKYENSGQWWEFDDEHVTNLGRHPFGEGSSTSTTKSAKNDPVHSESSESKISISNGNGSDPIQSLSSQSSAVGIVETFSSSDAYMLMYNLRRTRTSEKGNMVNGANEKKRESDVAAAQDSFSLVSHLFDEIQNMNASYLEACKKYNESKEAELSHITERRQEVRSILSEAPVQPLEKPFYLVSSDWLRQWAENVTPTTLDNTTIQCSHGKVPVSKVNLMKRLSCKAWEMLLSKYGGGPTLSDSDCCWDCLIDGARSVVSADTYRDRRESMKQLARGILDGNCLDGKYYISRPWLQQWWKRKVLDAPSEADAGPTASICCPHGQLIPEQATGAKRVLVPENFWLFLYEDALSVKPDDALGCPTFPSDSSQCSQCSDELSEVACMEDSLRLVKQMQRQNHEKLFQAKSMPLLLNCKYFLLPSSWILKWRNYVNPAVKNSDKPEALDGVIDSLMCEKHSLFVQKPPELFYRRGAIIQRESSGVGLTIISESDWKCFCEEWGGTEAKGISATIENDKDSENILGGSSKEMPISEDQLTAFDKGNNEGGTIQIVIKTCPEVCESCIGERQSCELMQKLNYYNEDISVILVRGKEVPRSILEASKGSVETDRRVSKRSRKTKNGSSINLKVSASTSLYQLKMMIWESFGVVKENQILQKGDKTIEIDDDNAVLADLNIFAGDQIIVRDSEIHENRDIADEICDEKMDVQHTEEGFRGTLLTANISSQVV 1535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00297 1535 Gene3D - 1424 1495 - -
Bva10g00297 1535 Gene3D - 1197 1317 IPR035927 -
Bva10g00297 1535 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 449 1504 - -
Bva10g00297 1535 ProSiteProfiles DUSP domain profile. 966 1058 IPR006615 GO:0004843
Bva10g00297 1535 ProSiteProfiles DUSP domain profile. 1073 1180 IPR006615 GO:0004843
Bva10g00297 1535 MobiDBLite consensus disorder prediction 62 84 - -
Bva10g00297 1535 MobiDBLite consensus disorder prediction 266 319 - -
Bva10g00297 1535 MobiDBLite consensus disorder prediction 833 877 - -
Bva10g00297 1535 SUPERFAMILY Cysteine proteinases 552 900 IPR038765 -
Bva10g00297 1535 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 344 394 IPR019273 -
Bva10g00297 1535 CDD Peptidase_C19L 555 900 IPR033841 GO:0004843
Bva10g00297 1535 SMART dusp 984 1060 IPR006615 GO:0004843
Bva10g00297 1535 SUPERFAMILY Ubiquitin-like 1428 1494 IPR029071 -
Bva10g00297 1535 CDD Ubl_USP48 1425 1526 IPR044743 GO:0004197|GO:0004843|GO:0016579
Bva10g00297 1535 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 791 809 IPR018200 GO:0004843|GO:0006511
Bva10g00297 1535 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 554 903 IPR028889 -
Bva10g00297 1535 MobiDBLite consensus disorder prediction 263 319 - -
Bva10g00297 1535 ProSiteProfiles DUSP domain profile. 1201 1321 IPR006615 GO:0004843
Bva10g00297 1535 MobiDBLite consensus disorder prediction 836 877 - -
Bva10g00297 1535 SUPERFAMILY DUSP-like 970 1053 IPR035927 -
Bva10g00297 1535 Gene3D Cysteine proteinases 541 904 - -
Bva10g00297 1535 Gene3D - 957 1055 IPR035927 -
Bva10g00297 1535 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 555 570 IPR018200 GO:0004843|GO:0006511
Bva10g00297 1535 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 449 1504 - -
Bva10g00297 1535 Coils Coil 198 221 - -
Bva10g00297 1535 MobiDBLite consensus disorder prediction 446 466 - -
Bva10g00297 1535 Pfam Ubiquitin carboxyl-terminal hydrolase 555 900 IPR001394 GO:0004843|GO:0016579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00297 Bva-Chr10 3784824 3799513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00297 552 832 Miscellaneous Gene Families AT4G31670 28.618 5.12e-24 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00297 - K11858 gmx:100782778 1719.52