Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00279 ATGCAACCCCAGCAGAGCTCAAGAATTGATTTGGGTGAATTGAAAGCACAAATAGTAAAGAAGATCGGGATAGACAAGTCAAAACGGTACTTTTATTACTTGAACGGGTTTCTGAGTCAGAAGCTGAGCAAGACTGAGTTTGATAAGCTATGTTATCGGGTTTTTGGGAGGGAGAACCTTTCATTGCACAATCATTTTATAAggtcaattttgaagaatGCATGCCAAGCAAAGACCCCACCATTGATCCAGTCTTCAGGTCCCACAAAGTCCTCAATACATGCTACGAACATATCTCCTAGTAGAGAAGATGGTCATGAGCAGAGTGGGGCCAGCTTccaaaatcagaatcaaaatgTACCCATTTGGTCAAATGGAGTTTTGCCAGTATCTCCACGGAAGGGAAGGTCTGGGATACGTGATCGGAAGCTTAGGGATAGACCAAGCcctcttggaccaaatgggaAGGTCGATTCTGTTTCTCATCAATCCACTGGTACAGAAGACAACGGTAGTAAGGTTGATATGGAGAATGGAACTCTTACTCCATTTGATTATCAGAGACCAATACAGCATCTTCAGGCAGTTGCTGAGCTACCTGAAAATGAAAGGGGAGATGCAGTTCAGCGACCTGGGGAAAAAACAAGAATACATGGCAAAGGGCCAACTGAAGCATCAATTGTTGAAGATGGGGAAGAAGTGGAGCAGTTAAACCGCTTGAGTTTCTCTAGAAGTCCCCTGCTTGCACCTCTTGGGATTCCATACTGCTCAGCAAGCGTGGGTGGGGCCCGCAAAGCTTTGCCAGTAGGTAGCACTGGTGATTTTGTTAGTTGTCATGACAGTGGTAGTTTGTCCGATACAGATACACTGAGAAGGCGCATGGAGCAGATTGCAGCAGTACAGGGACTTGGAGGTGTTTCTATGGAATGTGCCAATATGTTAAATAATGTGTTGGACGTATACTTAAAACGGTTAATCAGATCTTGTGTTGATTTAGTGGGAGCTAGGTCTACAAATGAGCTGAGGAAGCTCTCAGCTCTCAAACAGCAGATTCAAGGTAAAGTTATTAATGGCATGTGGCCAAGTAATCATTTACATTTACAGAGCGGTGGTGGGTCAGCAGAAACTGTGACTGAACACAGACCACCAAGCACGGTATCTTTGCTTGATTTTAAAGTGGCCATGGAGCTGAATCCACAGCAACTTGGAGAAGATTGGCCGTTGCTGTTGGAGAAAATTTCCACGCACGCATTTGACGAATA 1262 0.4279 MQPQQSSRIDLGELKAQIVKKIGIDKSKRYFYYLNGFLSQKLSKTEFDKLCYRVFGRENLSLHNHFIRSILKNACQAKTPPLIQSSGPTKSSIHATNISPSREDGHEQSGASFQNQNQNVPIWSNGVLPVSPRKGRSGIRDRKLRDRPSPLGPNGKVDSVSHQSTGTEDNGSKVDMENGTLTPFDYQRPIQHLQAVAELPENERGDAVQRPGEKTRIHGKGPTEASIVEDGEEVEQLNRLSFSRSPLLAPLGIPYCSASVGGARKALPVGSTGDFVSCHDSGSLSDTDTLRRRMEQIAAVQGLGGVSMECANMLNNVLDVYLKRLIRSCVDLVGARSTNELRKLSALKQQIQGKVINGMWPSNHLHLQSGGGSAETVTEHRPPSTVSLLDFKVAMELNPQQLGEDWPLLLEKISTHAFDE 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00279 420 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 4 333 IPR024738 GO:0070461
Bva10g00279 420 MobiDBLite consensus disorder prediction 135 149 - -
Bva10g00279 420 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 1 420 - -
Bva10g00279 420 MobiDBLite consensus disorder prediction 81 175 - -
Bva10g00279 420 MobiDBLite consensus disorder prediction 156 175 - -
Bva10g00279 420 MobiDBLite consensus disorder prediction 81 125 - -
Bva10g00279 420 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 420 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00279 Bva-Chr10 3701259 3703006 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00279 - - gmx:100819343 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00279 10 3701259 3703006 Bva06g02485 06 15798032 15801639 BWGD