Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00268 ATGGACAATTCCGACGACCAGTTCGACGTTATTATCGTCGGAGCAGGGGTGATGGGAAGCTCCACTGCCTACCAAACGGCGAAGAGGGGTCTGAGAACCCTTTTGGTGGAGCAGTTTGACTTGTTGCACCACCGTGGCTCCTCCCATGGCGAGTCTCGTACCATACGGGCCACTTACTCGAAGCACTACTACTGCCCTTTGGTCATGGAATCCTACCATCTCTGGCAACAGGCCGAGGCCCAAATCGGCTACAAGGTCTATTTCAAAGCCCATCAATTCGAGATGGGACCCGACGACGATGACAACCTCCTGGCCATCGTTGACAACTGCCGCAGATATTCCGTCCCCCACCAAGTCCTCCGCCGCCACGAGGTTACCGAGAAATTCTCCGGCCGCATTGACATACCAGACAATTGGATTGGGGTGTCCAACGAGTTTGGTGGGGTCATAAAGCCCACAAAAGCCGTGGCCATGTTCCAGGCGCTGGCTCACAAGAATGGTGCCGTTCTGCGGGACAACACGAAGGTTACAGATATTAAGAAAGACAACGTCAGAGGCGGCGTGGTGGTTTCAACCGCAGATGGCGGAAGGTTTTGGGGTAAAAAATGCGTGGTTACTGTTGGCGCCTGGATGAAGAAGTTAGTTAAAACGGTTAGTGGGCTTGAATTGCCTATAGAGCCTAAGGAGACTTATGTCTGTTACTGGAGAATCAAGGAGGGGCACGAAGAGAAGTATGCTATTACCGGCGATTTCCCGACTTTTTCGAGCCATGGGAAGTTTCATGTGTTCGGAACGCCGGCTCTGGAGTACCCTGGTTTGATCAAAGTGACGTCGCATGCGGGGATCCCATGTGACCCGGATAAGAGGCCGTGGGGCCCCGGAGAGCTTTTGGATTCATTGAAAGAATGGGTCAAGGAGAGATTCCAGGGGTTGGTGGATTTCAGCGAGCCAGCTATGAAGCAGTGTTGCATGTACACTATGACACCGGACGAGGATTTTGTGATTGATTTCTTGGGCGGGGAGTTCGAGAAAGATGTGGTCGTTGGTGGCGGGTTTTCGGGTCATGGGTTCAAGATGGGTCCGGTGGTTGGGCGGATATTAGCTGACATGGTGGTAGATGGGGAAGCAAATGGGGTGGAGATGAAATATTTTAGCATTGCAAGGTTTAAGGATACCCAGTATTGTCCGAATTA 1193 0.5214 MDNSDDQFDVIIVGAGVMGSSTAYQTAKRGLRTLLVEQFDLLHHRGSSHGESRTIRATYSKHYYCPLVMESYHLWQQAEAQIGYKVYFKAHQFEMGPDDDDNLLAIVDNCRRYSVPHQVLRRHEVTEKFSGRIDIPDNWIGVSNEFGGVIKPTKAVAMFQALAHKNGAVLRDNTKVTDIKKDNVRGGVVVSTADGGRFWGKKCVVTVGAWMKKLVKTVSGLELPIEPKETYVCYWRIKEGHEEKYAITGDFPTFSSHGKFHVFGTPALEYPGLIKVTSHAGIPCDPDKRPWGPGELLDSLKEWVKERFQGLVDFSEPAMKQCCMYTMTPDEDFVIDFLGGEFEKDVVVGGGFSGHGFKMGPVVGRILADMVVDGEANGVEMKYFSIARFKDTQYCPN 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00268 397 TIGRFAM soxA_mon: sarcosine oxidase, monomeric form 8 392 IPR006281 GO:0008115
Bva10g00268 397 SUPERFAMILY FAD-linked reductases, C-terminal domain 228 329 - -
Bva10g00268 397 Pfam FAD dependent oxidoreductase 9 370 IPR006076 GO:0016491
Bva10g00268 397 Gene3D - 91 327 - -
Bva10g00268 397 PANTHER PEROXISOMAL SARCOSINE OXIDASE 4 392 IPR045170 GO:0016491|GO:0050660
Bva10g00268 397 SUPERFAMILY FAD/NAD(P)-binding domain 7 390 IPR036188 -
Bva10g00268 397 Gene3D - 8 375 IPR036188 -
Bva10g00268 397 PANTHER PEROXISOMAL SARCOSINE OXIDASE 4 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00268 Bva-Chr10 3656784 3658440 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00268 K00306 - tcc:18587639 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00268 10 3656784 3658440 Bva10g00268 10 3656784 3658440 ECH