Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00256 ATGGCAGTGCCTGATTATGAAGCCAAGTATCTTGACGACCTTGACATTATGAAGTTCCTTGAAGCTGAAGCTGTTGAGTTCCTTTTATCTTCTGAAGGAAAGGTACCATTATCATCATGCCAAGGGAAAACCATATGTCTTTTCTTCTCTGCAAACTGGTGCAGGCCTTGCAGAACATTCATCCCCCATCTGGTTGAACTTCATGACACATTGCGAAAGAGAGATAAAAGTCTAGAGATCATCTTCATCTCCTTTGACCGCGATGAGGATGGATTTAATGAACACCTGAAGAACATGCCGTGGCTGGCTGTCCCATTTGATGTAACTTTGCACAGAAGACTGATTGACAGGTACCGGGTTGATCGAATCCCATCATTCATTCCCTTATGTTCTGATGGCATAACGGTTGAAGAAGACATGACTGGGTTCATTGAGGATTATGGCACTGAAGCATTTCCCTTCACAAGGAAGAGACGTGAGGAATTGAAAGCAATAGATAAAAGAAAGCGTGAAGAAGCAAGTTTGGAAGAATTATTGGCACATGAAGGACGAAACTTCCTCATATCCGCAGATGATAGAAAGGTACCAGTATCTGAACTTGTGGGTAAAACAATAGGCCTCTACTTTTGCGCTTACTGGTCTCCTCCTTGCCGTGCCTTTACTGTACAACTTACAGAAGCATACAACAATCTCGTGACTGTAAAAGATCGTGGCTTTGAGATTGTTTTGGTCTCAACAGATAGAGATCTCAAGGAATTCAAGGTTAATTTAAATAGCATGCCATGGCTTGCTATCCCTTATGAGGACAGAACAAGGCACGACCTTTGTAGAATCTTTGATATCAAAGGAATTCCAGCTTTGGTTCTCATTGGACCAGATGGTAAAGTCATTACCATGAATGGAAAATTTATCGTCTCCTCCTATGGCGCTGAAGCGTTCCCATTTACCGAATCACGGATAAGAGACCTAGAAGCAGCTCTGAGAAAGGAAGGAGAGGCTTTACCTCATCAGGTTGAGGATGTGAAGCATGAGCATGTGCTGAAGTTGGATATGGCCAAAGCATATGTTTGTGATTTCTGTAAAAAGCAGGGAAGGTTCTGGGCATTCTCTTGTGATGTTTGTGACTATGACCTTCACCCCAGCTGTGTAGGAATGGTCAAGAAAGATGAATGCTTTCTACAGAATACAATCACAGCAACTTTGCAACCAGAGATATA 1217 0.4248 MAVPDYEAKYLDDLDIMKFLEAEAVEFLLSSEGKVPLSSCQGKTICLFFSANWCRPCRTFIPHLVELHDTLRKRDKSLEIIFISFDRDEDGFNEHLKNMPWLAVPFDVTLHRRLIDRYRVDRIPSFIPLCSDGITVEEDMTGFIEDYGTEAFPFTRKRREELKAIDKRKREEASLEELLAHEGRNFLISADDRKVPVSELVGKTIGLYFCAYWSPPCRAFTVQLTEAYNNLVTVKDRGFEIVLVSTDRDLKEFKVNLNSMPWLAIPYEDRTRHDLCRIFDIKGIPALVLIGPDGKVITMNGKFIVSSYGAEAFPFTESRIRDLEAALRKEGEALPHQVEDVKHEHVLKLDMAKAYVCDFCKKQGRFWAFSCDVCDYDLHPSCVGMVKKDECFLQNTITATLQPEI 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00256 405 PANTHER THIOREDOXIN 1 386 - -
Bva10g00256 405 ProSiteProfiles Thioredoxin domain profile. 177 325 IPR013766 -
Bva10g00256 405 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 342 391 IPR002219 -
Bva10g00256 405 Pfam Thioredoxin-like 42 129 IPR012336 -
Bva10g00256 405 Pfam Thioredoxin-like 202 296 IPR012336 -
Bva10g00256 405 SUPERFAMILY Thioredoxin-like 29 146 IPR036249 -
Bva10g00256 405 ProSiteProfiles Thioredoxin domain profile. 1 170 IPR013766 -
Bva10g00256 405 Pfam C1 domain 342 383 IPR004146 -
Bva10g00256 405 Gene3D Glutaredoxin 178 317 - -
Bva10g00256 405 PANTHER NUCLEOREDOXIN 3-RELATED 1 386 - -
Bva10g00256 405 Gene3D Glutaredoxin 20 158 - -
Bva10g00256 405 SUPERFAMILY Thioredoxin-like 187 298 IPR036249 -
Bva10g00256 405 CDD TryX_like_TryX_NRX 185 315 IPR045870 GO:0004791
Bva10g00256 405 SUPERFAMILY Cysteine-rich domain 335 384 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00256 Bva-Chr10 3600734 3602759 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00256 K17609 - gmx:100778160 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00256 10 3600734 3602759 Bva10g00256 10 3600734 3602759 ECH