Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00250 ATGGATCAAAACTTCGATCTGAGCGCTCCTCATTCCATGGGGACCACAATTGTTGGCGTCACTTACAACGGTGGTGTTATTCTCGGAGCCGATTCCCGAACCAGCACTGGAGTATACGTTGCCAATCGGGCATCAGACAAAATCACACAGCTGACTGATAATGTCTATGTTTGTCGCTCTGGATCGGCTGCAGATACTCAGATTATCTCTGATTATGTGCGCTACTTCCTTCATCAACACACGATACAGCTTGGACGCCCTGCAACTGTCAAAGTTGCTGCAAACCTTGTTCGGCTTCTATCCTATAACAACAAGAATATGTTGCAAGCTGGCTTAATTGTTGGTGGGTGGGACAAATATGAAGGTGGACAAATTTTTGGAATTCCCCTGGGTGGAACTATAATACAACAACCTTTTGCTATTGGAGGATCTGGATCCAGTTACTTGTATGGATTTTTTGATCAAGCATGGAAAGAAGGAATGACCAAGGAAGAAGCTGAGCAATTAGTAGTCAAGGCAGTTTCACTGGCTATTGCACGTGATGGTGCTAGTGGCGGTGTCGTTCGTACAGTAACTATAAATTCAGAGGGAGTGACCAGAAATTTCTATCCTGGGGACACACTTCCAATTTGGCACGAGGAGTTGGAGGCTAAGAATTCATTGTTGGACATACTTAATGCCTCCCCTAGTCCTGAACCAATGAATATATA 710 0.4451 MDQNFDLSAPHSMGTTIVGVTYNGGVILGADSRTSTGVYVANRASDKITQLTDNVYVCRSGSAADTQIISDYVRYFLHQHTIQLGRPATVKVAANLVRLLSYNNKNMLQAGLIVGGWDKYEGGQIFGIPLGGTIIQQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVTRNFYPGDTLPIWHEELEAKNSLLDILNASPSPEPMNI 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00250 236 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 15 219 IPR029055 -
Bva10g00250 236 ProSitePatterns Proteasome beta-type subunits signature. 18 65 IPR016050 GO:0005839|GO:0051603
Bva10g00250 236 PANTHER PROTEASOME SUBUNIT BETA 7 228 - -
Bva10g00250 236 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 8 200 IPR029055 -
Bva10g00250 236 CDD proteasome_beta_type_6 15 202 - -
Bva10g00250 236 ProSiteProfiles Proteasome beta-type subunit profile. 14 193 IPR023333 -
Bva10g00250 236 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 7 228 - -
Bva10g00250 236 PRINTS Proteasome component signature 179 190 IPR000243 GO:0004298|GO:0005839|GO:0051603
Bva10g00250 236 PRINTS Proteasome component signature 22 37 IPR000243 GO:0004298|GO:0005839|GO:0051603
Bva10g00250 236 PRINTS Proteasome component signature 154 165 IPR000243 GO:0004298|GO:0005839|GO:0051603
Bva10g00250 236 PRINTS Proteasome component signature 143 154 IPR000243 GO:0004298|GO:0005839|GO:0051603
Bva10g00250 236 Pfam Proteasome subunit 13 193 IPR001353 GO:0005839|GO:0051603
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00250 Bva-Chr10 3576392 3580082 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00250 K02738 - dcr:108204699 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00250 10 3576392 3580082 Bva10g00250 10 3576392 3580082 ECH