Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00249 ATGAGGGTTCAGCAGGAAGGTGACGGAGTTTCTGCATCCAAAAAGCAATTGGTCTTCGCTTACTATGTCACTGGTCATGGTTTTGGTCATGCCACTCGTGTTGCTGAGGTAGTGCGCCATCTAATCCTCGCCGGCCATGATGTGCATGTTGTCACCGGCGCTCCTGACTTTGTTTTCACCTCAGAAGTACAGTCTCCTCGACTCTTCATTCGGAAGGTGCTTTTGGATTGTGGAGCAGTTCAAGCAGATGCCTTGACCGTGGATCGCCTTGCCTCTTTGCAGAAGTATTCTGAGACGGCTGTGAAACCCCGGGCTACTATCATggcaaaagaaatagaatggCTGAAATCCATCAAAGCTGATTTAGTGGTCTCTGATGTTGTACCGGTTGCATGTCGAGCGGCAGCAGATGCTGGCATTCGATCTGTTTGTGTTACTAACTTTAGTTGGGACTTCATCTATGCGGAATATGTTATGGCTGCTGGACTTCATCATCGTTCAATAGTTTGGCAGATAGCCGAGGATTATTCCCACTGTGAGTTCCTTATCCGCCTCCCAGGATATTGCCCAATGCCTGCTTTTCGCGATGTCATTGATGTACCTCTGGTTGTGAGGAGGTTGCAAAAATCTCCAAAAGAGGTGAGAAAGGAACTCGGAATACAAGAGAACACGAAGCTCGTTATCCTCAACTTTGGCGGCCAGCCAACGGGATGGACGTTGAAGGAGGAGTTCTTACCTTCGGGCTGGTTGTGTCTGGTTTGCGGTGCTTCTGATAGTGAGGACCTTccaaaaaatttcagaaaactAGCCAAAGATGCATATACGCCTGACATCATTGCAGCATCTGACTGTATGCTTGGAAAGATTGGATATGGCACTGTTAGTGAAGCCCTGGCATACAAGTGTCCCTTTGTCTTTGTACGCAGAGATTATTTCAATGAAGAAccatttttgagaaatatgcTTGAGTACTATCAAGGAGGTGTTGAAATGATCAGGAGGGATTTACTCACTGGTCACTGGAAACCTTATCTTGAACGGGCAATAAGTTTGAAACCGTGCTATGACGTAGGCATTAACGGTGGTGAGgTGGCAGCCCACATCTTGCAGGAGACAGCTTCTGGAAAAAATTATGCATCAGATAAGCTTAGCGGAGCAAGAAGATTGCGTGATGCCATAGTTCTTGGGTATCAACTACAAAGGGCCACTGGACGAGACCTTGCAATCCCAGAATGGTATGCAACTGCTGAAACCCACCTCGGCGCCGCACCCACACCTGATGATGACTTAAGCTCCCCATTACACCCGCACCATGAAGACTTCAAGATTGTTCATGGAGATGTTCAAGGTCTTCCAGATACCATTGCTTTCTTAAAGAGCTTATCAGAACTTGATGAGAAGCACCCGACAAGGGAGCAAAAGGCTGCTGCTAATCTCTTCAATTGGGAGGAGGAAATTTTTGTGACTAGAGCTCCTGGACGGTTAGATGTGATGGGTGGTATAGCTGACTACTCTGGAAGCCTTGTCCTGCAGATGCCGATAAGAGAAGCCTGTCATGTTGCTCTGCAGAGAGTCCCTCCAAGTAAACATAGGCTGTGGAGGCATGCCCAAGCTCGACAGGATGACAAAGGATCAAAACCAAATGCTGTCTTTCAAATAGTATCATATGGCTCAGAGTTGAGCAATCGTGGCCCAACCTTTGACATGGATATGTCTGACTTTATGGATGGAGGAAAGCCGATCTCATATGAAAAAGCAAAGGCATACTTCTCTCAAGATCCTTCCCAGAAGTGGGCAGCATATGCTGCTGGGGCAATTGTAGTTTtaatgcacgaacttggtgtACGTTTTGAAGATAGTATCAGCCTGCTGgTTTCATCTGCAGTCCCCGAAGGGAAAGGAGTATCATCTTCTGCTGCTTTGGAGGTTGCTAGCATGTCTGCTCTTGCAGCTGCTCATgGATTGAACATCAGTCCAAGAGATCTGGCCTTGCTCTGCCAGAAGGTGGAAAATCATATTGTAGGAGCTCCATGCGGTGTCATGGACCAGATGACTTCAGCATGCGGTGAAGCCAACCAACTTCTTGCAATGATTTGCCAGCCTGCTGAGATTGTTGGTCTTGTGGAAATTCCCAACCATATTCGATTCTGGGGAATTGATTCTGGAATTAAACACAGTGTTGGAGGTGCAGACTACGGATCTGTCAGAATTGGCACCTTTATGGGTCTAAAGATGATAAAGTCCAGAGCAAGTGAAGTACTGTCCGAGATATCTGCTAGTGGGATGAACCGCGATGAAGTGGAGAAAGAAGACATAGAACTACTTGAAAAAGAAGCCTCATTAGATTACTTGTGCAATTTGCCACCTCACAGATTTGAGTCTCTTTATGTTAAGACAATCCCCGAATCCATTACTGGTGAGGCgtttttgaagaaatatacCAATCATAATGATCCTGTCACTGTTATTGATCAGAAGCGTACTTATGTGGTGAAGTTTCCTACAACACATCCTATCTACGAAAATTCCCGAGTCAAGAATTTTAAATCACTTCTGACATCAACACCTTCAATTGATCAACTTGCAGCTCTTGGAGAGTTGCTATATCAGTGCCACTACAGCTACAATGCTTGTGGACTTGGCTCTGATGGTACAGATAGGCTTGTGCAGTTGGTACAAGACTTTCAGCATAGCACAGCATCCATATCTGAAGGGGGAACATTAAGTGGAGCAAAGATTACTGGTGGTGGCTCTGGTGGAACGGTTTGTGTAATTGGTAGAAATTGTCTCAAGAGCAGCGAACAAATTCTTGagGTTCAGCGTAGGTACAAGAAAGCCACAGGTTATTTGCCCTTTATATTTGAGGGTTCATCCCCGGGTGCTGGGAAGTTTGGCCATCTGAGAATACGCCGAGGTGGTGCTCCTGCTAAAAGTTCTGCTCCCGCTAAAAGTTA 2954 0.4479 MRVQQEGDGVSASKKQLVFAYYVTGHGFGHATRVAEVVRHLILAGHDVHVVTGAPDFVFTSEVQSPRLFIRKVLLDCGAVQADALTVDRLASLQKYSETAVKPRATIMAKEIEWLKSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGLHHRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLQKSPKEVRKELGIQENTKLVILNFGGQPTGWTLKEEFLPSGWLCLVCGASDSEDLPKNFRKLAKDAYTPDIIAASDCMLGKIGYGTVSEALAYKCPFVFVRRDYFNEEPFLRNMLEYYQGGVEMIRRDLLTGHWKPYLERAISLKPCYDVGINGGEVAAHILQETASGKNYASDKLSGARRLRDAIVLGYQLQRATGRDLAIPEWYATAETHLGAAPTPDDDLSSPLHPHHEDFKIVHGDVQGLPDTIAFLKSLSELDEKHPTREQKAAANLFNWEEEIFVTRAPGRLDVMGGIADYSGSLVLQMPIREACHVALQRVPPSKHRLWRHAQARQDDKGSKPNAVFQIVSYGSELSNRGPTFDMDMSDFMDGGKPISYEKAKAYFSQDPSQKWAAYAAGAIVVLMHELGVRFEDSISLLVSSAVPEGKGVSSSAALEVASMSALAAAHGLNISPRDLALLCQKVENHIVGAPCGVMDQMTSACGEANQLLAMICQPAEIVGLVEIPNHIRFWGIDSGIKHSVGGADYGSVRIGTFMGLKMIKSRASEVLSEISASGMNRDEVEKEDIELLEKEASLDYLCNLPPHRFESLYVKTIPESITGEAFLKKYTNHNDPVTVIDQKRTYVVKFPTTHPIYENSRVKNFKSLLTSTPSIDQLAALGELLYQCHYSYNACGLGSDGTDRLVQLVQDFQHSTASISEGGTLSGAKITGGGSGGTVCVIGRNCLKSSEQILEVQRRYKKATGYLPFIFEGSSPGAGKFGHLRIRRGGAPAKSSAPAKS 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00249 984 PRINTS Mevalonate kinase family signature 910 927 - -
Bva10g00249 984 PRINTS Mevalonate kinase family signature 670 689 - -
Bva10g00249 984 PRINTS Mevalonate kinase family signature 491 515 - -
Bva10g00249 984 PRINTS Mevalonate kinase family signature 627 649 - -
Bva10g00249 984 Gene3D - 470 717 IPR014721 -
Bva10g00249 984 PIRSF Gal_kin_glcsltr 1 975 IPR012369 -
Bva10g00249 984 Gene3D - 817 948 IPR036554 -
Bva10g00249 984 Pfam GHMP kinases N terminal domain 623 689 IPR006204 GO:0005524
Bva10g00249 984 Gene3D Glycogen Phosphorylase B; 22 179 - -
Bva10g00249 984 Gene3D Glycogen Phosphorylase B; 207 350 - -
Bva10g00249 984 PANTHER MEVALONATE KINASE/GALACTOKINASE 17 970 - -
Bva10g00249 984 SUPERFAMILY Ribosomal protein S5 domain 2-like 484 703 IPR020568 -
Bva10g00249 984 Pfam Galactokinase galactose-binding signature 480 523 IPR019539 -
Bva10g00249 984 Pfam GHMP kinases C terminal 861 944 IPR013750 -
Bva10g00249 984 PANTHER L-ARABINOKINASE 17 970 - -
Bva10g00249 984 SUPERFAMILY GHMP Kinase, C-terminal domain 714 962 IPR036554 -
Bva10g00249 984 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 23 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00249 Bva-Chr10 3564573 3574513 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00249 K12446 - gmx:100787860 1632.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00249 10 3564573 3574513 Bva10g00249 10 3564573 3574513 ECH