Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00239 ATGTTCTCACAGTCATACTTGCGCTTGTCGTTTCACTCTCGCCTCTCTTCGATTCTGAAGCTAATTAACGATGAAAAGGGCAAAAGCAACTTCGgttccattttctcttcactTGGAGTTATTCTAAGAACTTCAGGGAGTTTAGAGCTTATGGCCAGGTCTCGATGCTGTAACATTTCACCTGCAAGGATGGGATGGGGAAACATTTACAGAAGACGTGTTAGAGTGTTCACAGTGGCTTTGATAGTCTACCTGGATTACAAGGCTgttcaacaaagagagaaatggACTAGCAAATCTAGACAATCTGCTTTATGGGAAAGGGCTCATGAGCGCAATGCTAAGCgtgttttgaatttgataataGAGCTGGAAGGCTTGTGGGTGAAACTTGGGCAATATTTGTCCACACGCGCAGATGTGCTTCCCCAATCATATATACGTCTTCTGAAGCAGTTACAGGACTCTCTTCCTCCTCGCCCTTTGGAAGAGGTCTATGGTACAATACAGAAAGAATTGGGGAAATCAATGGATGAGCTGTTCATGAACTTTGACAATGAACCTTTGGCAACAGCATCGATAGCCCAAGTCCATCGTGCAACTCTGCTTGATGGGCAGGAAGTTGTTGTTAAAGTTCAACATGATTGTATCAAGACAATCATATTGAAgGATTTAGAAAATGCCAAGGCCATTGTTGACTGGATAGCATGGGCTGAACCACAATATAACTTCAATCCTATGATAGATGAATGGTGCAAAGAAGCCCCGAAAGAACTTGACTTCAATCAGGAAGCTGAGAACACTAGAACAGTGGCTAAAAATCTTGGCTGCAGAAACCAGTATGATGGCAATACGAAGGCCAATCAAGTGGATGTCTTAATACCGGAAGTAGTTCAGTCTACAGAAAAAGTCCTTATTTTGGAGTACATGGATGGCATTCGTTTGAATGATTCTGAATCACTAGAAGCTTTTGGCGTAGACAAACAGAAGATTGTTGAGGAGATTACTCGTGCATATGCACACCAAATTTATGTTGATGGATTTTTCAATGGCGACCCTCATCCTGGAAATTTTCTTGTGAGCAAGGAATCTCCGCACCGTCCTATTTTACTTGACTTTGGGCTTACGAAGAAACTATCAAACTCCTTTAAGCAAGCAGTTGCAAAGATGTTTTTGGCATCTGCCGAGGGAGACCATGTAGCACTCCTTTCTGCCTTTGCAGAAATGGGGCTTAAGTTAAGGCTGGACATGCCAGAGCAGGTCATGGAGGTGACAACAATATTCTTTCGTTCAACAACACCTGCAAAAGAATCTTATGAAACCATGAAATCTTTGGCTGATAAAAGAGCCAAAAATATGAAGGTTATACAGGAGAAAATGAACCTCAaccaaaaggaaatgaaaCGCTTTAATCCTgTTGATGCATTTCCAGGTGATATCATAATATTTGGAAGGGTTCTTAATCTTCTAAGAGGGCTTTCTTCCACCATGAATGTTCGCATCGTATATATGGACATAATGAGGCCATTTGCAGAATCAGTTTTGAGTGGGTACGTACATAGAGGACCATCAGAAAATCATAAATGGATCTATGATTCACCTCCCCATTCTCTAGTAGAGGACAAGCTGAGAAATCTTCTAATTGAGCTAGGGAATCAAGATAGAATACTTGGAATCCAGGTATGTGCCTACAAAGATGGAGAGGTCATTATTGACACTGCTGCTGGAGTGCTTGGTAAATATGATCCTCGTCCTGTTCAGCCTGACACCCTTTTTCCAGTTTTCTCCGTGACAAAGGGTATCACAGCAGGAATGCTACATTGGCTGGTTGACAATGGAAAACTAAAGCTTGAAgagaatatttcaaatatatggCCAGCATTCGGATCAAATGGAAAGGATGCAATAAAGGTTCATCACGTGCTTAACCATACATCTGGCCTGCACAACGCAATGGCAGATATTACTAGAGAAAACCCCATGTTGATGTTTGATTGGGATGAATGTTTGAACCGTATTTGTATGTGTGCGCCAGAAACTGAACCTGGCAAGGAGCAGTTTTATCATTACCTGTCATTTGGCTGGTTGTGTGGTGGAATCATTGAGCATGCATCAGGCAAGAAATTTCAGGAGGTCCTTGAAGAGGCCATAGTTCGCCCCCTCAATGTTGAAGGAGAGCTATATATAGGAACTCCTCCAGGGGTGGAGTCACGCCTTGCAGCTCTAACAGTAGACACGGATGATTTAAGCAAGATATCAGGGATCACCAATCGTCCTGAACTTCCTTCCTCCTTCCAGCCACAGCAAATTGCTCAGCTTGCCACCACTCTGCCTTCTCTTTTCAATATGCTCAATGTTCGCCGCGCCATCATACCAGCTGCTAATGGGCATGTGTCTGCCCGGGCTCTAGCACGTTATTATGCAGCCCTAGCCGACAGTGGCAATATACCACCACCTCATTCCTCTGCTTCCAAGCCACTGCTTGGAAGTCATCCACATATCCCCAAATTTTCTTCTCAGAAGACCTCAAGTAAGCCGAAAAGCAACAGAAGTAAGAAAATGAAGACTTTAACTAAAGGAACCAACAGTCGTGAAGAAAACTCTAGTATCAAAGATGGTTATGTTAGCGTTCCTACTGATATCAGCATTAGTGAAAGCAATAATGGAAGAATGTCCGACAGTAGTGATAGCAATCCACAAATGCATCTTTCTTCTAAGCTCTTTGAAAATCCCAGAATTATTGATGAATTCCGGGGTACAGGAGAGTACCAGAATTTGGCATTGCCAGATGGTGGTTTTGGCCTAGGATTCAAGAGGATTAAAAACGACAGGTCGTCCATTGCGTTCGGGCACTCAGGAATGGGCGGTTCCACGGGATTTTGTGATGCAACAAATAGGTTTGCCATTGCTGTGACCCTAAACAAAATGTCGTTTGGCGGTGTGACGGGAAAAATTGTTCAGTTTGTTTGTTCTGAGTTGAACATTCCTGTGCCAGAGGACTACTTAAGGTTAGCGGTTGCACAGGGAGGACCGGAGGCCCAATTAAATATGGGCAGACCTATCATTAACTG 3071 0.4204 MFSQSYLRLSFHSRLSSILKLINDEKGKSNFGSIFSSLGVILRTSGSLELMARSRCCNISPARMGWGNIYRRRVRVFTVALIVYLDYKAVQQREKWTSKSRQSALWERAHERNAKRVLNLIIELEGLWVKLGQYLSTRADVLPQSYIRLLKQLQDSLPPRPLEEVYGTIQKELGKSMDELFMNFDNEPLATASIAQVHRATLLDGQEVVVKVQHDCIKTIILKDLENAKAIVDWIAWAEPQYNFNPMIDEWCKEAPKELDFNQEAENTRTVAKNLGCRNQYDGNTKANQVDVLIPEVVQSTEKVLILEYMDGIRLNDSESLEAFGVDKQKIVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKESPHRPILLDFGLTKKLSNSFKQAVAKMFLASAEGDHVALLSAFAEMGLKLRLDMPEQVMEVTTIFFRSTTPAKESYETMKSLADKRAKNMKVIQEKMNLNQKEMKRFNPVDAFPGDIIIFGRVLNLLRGLSSTMNVRIVYMDIMRPFAESVLSGYVHRGPSENHKWIYDSPPHSLVEDKLRNLLIELGNQDRILGIQVCAYKDGEVIIDTAAGVLGKYDPRPVQPDTLFPVFSVTKGITAGMLHWLVDNGKLKLEENISNIWPAFGSNGKDAIKVHHVLNHTSGLHNAMADITRENPMLMFDWDECLNRICMCAPETEPGKEQFYHYLSFGWLCGGIIEHASGKKFQEVLEEAIVRPLNVEGELYIGTPPGVESRLAALTVDTDDLSKISGITNRPELPSSFQPQQIAQLATTLPSLFNMLNVRRAIIPAANGHVSARALARYYAALADSGNIPPPHSSASKPLLGSHPHIPKFSSQKTSSKPKSNRSKKMKTLTKGTNSREENSSIKDGYVSVPTDISISESNNGRMSDSSDSNPQMHLSSKLFENPRIIDEFRGTGEYQNLALPDGGFGLGFKRIKNDRSSIAFGHSGMGGSTGFCDATNRFAIAVTLNKMSFGGVTGKIVQFVCSELNIPVPEDYLRLAVAQGGPEAQLNMGRPIIN 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00239 1023 Coils Coil 445 465 - -
Bva10g00239 1023 CDD ABC1_ADCK3-like 152 406 - -
Bva10g00239 1023 PANTHER ABC1 FAMILY PROTEIN 64 1013 - -
Bva10g00239 1023 MobiDBLite consensus disorder prediction 817 901 - -
Bva10g00239 1023 MobiDBLite consensus disorder prediction 861 901 - -
Bva10g00239 1023 SUPERFAMILY beta-lactamase/transpeptidase-like 541 818 IPR012338 -
Bva10g00239 1023 SUPERFAMILY Protein kinase-like (PK-like) 154 377 IPR011009 -
Bva10g00239 1023 Pfam ABC1 atypical kinase-like domain 152 402 IPR004147 -
Bva10g00239 1023 Gene3D - 906 993 IPR012338 -
Bva10g00239 1023 Gene3D - 541 855 IPR012338 -
Bva10g00239 1023 Pfam Beta-lactamase 544 820 IPR001466 -
Bva10g00239 1023 PANTHER ABC1 FAMILY PROTEIN 64 1013 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00239 Bva-Chr10 3524384 3534536 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00239 K08869 - gmx:100802638 1581.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00239 10 3524384 3534536 Bva10g00239 10 3524384 3534536 ECH