Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00229 ATGGGTTGTGCACAATCGAGAATAGACAATGAGGAATCAGTGGCTCGCTGTAAGGAGCGTAAGAACCTCATGAAAGAAGCGGTGGTAGCTCGAAACGCCTTTGCTGCTGGCCATTCCGGCTATACCATGGCTTTGAAAAACACCGGCGCTGCTCTAAGCGACTACGCTCACGGGGAAAGCCAGGTGAACCACGAACTCCACCAGGAGCCATTGGACACCGCTTCACAGCCACCACCTCCGCCGCCACCCCCAATGGAAGACAACCTTCCGCCGCCTCCGCCGCCGCTCCCAAATTTCTCTCCAAGCCCACTCAAGCGCGCTGCAACCATGCCAGCAATCACCATACAACACCGAAATCCCGCTCGTGAAATCAATTCCGAGGCCATTGCtgaagaagatggagaagaTGAGGATGTGAAAGTGGATGAGGGTAACCGAGGGAAGCCAATGAAAAAGGGAGCTGGGGTGGTAGGATCGGAAGATGTGCCTCATTCTCCGCCACGGGCCCCAGATATGAAATCAGTGCCGCCGATGCCTGAAGCAAAGGGCATGGCTTGggattattttttcatgatgGACAATATGGCAGGACCATCTTTGAGTGCGGAAGACGAGATTGGGGCTGTGAATGGTGAGAATGAAGCTGTGGATTATGGTGAAGTTGAGAATGTGGATGGTAATGGAGGTAATTTAGCTAACGGGATTAACGAGATTGAGCCGAAGACGCCAGAGAAGGTGGAGCAACATTTGCAGGAAGAGGAGATAGCAGAACCCGTCAACGAGAAAAAGCAAATTAAGCATTCGAAAACAGCGCCACCAGAATTTAGGAGAGCAATGAAGGTGGCTCCAAGTGTTACCCTGATGCAGATTCTGAATGCGCTTGACGATCATTTTTTGAAGTCTTCAGAGAGTGCACAGGAGGTTAACAAGATGCTTGAGGCCACTAGGTTGCattatcattcaaatttcGCAGACAATCGAGGACATATTGATCACTCTGCTAGAGTTATGCGTGTGATAACATGGAACAGGTCATTCAGAGGTTTATCTAATGGTGATGGTGCAAAGGATGATTTTGATTCAGAAGAATATGAAACTCATGCCACTGTTTTGGATAAGTTGTTAGCCTGGGAAAAGAAACTTTATGAAGAAGTGAAGCAAGGTGAGCTTATGAAGTTCGAATATAAGAGAAAAGTTGCACTTCTGAACAAGCAGCAGAAACGTGGTGCCAGTGCTGAATCTctggaaaaaacaaaagcagcaGTGAGTCATTTGCATACGAGATATATTGTTGACATGCAGTCAATGGATTCAACAGTTTCAGAAGTGAATCACATACGTGATGCACAGCTGTATCCAAAACTTGTTGCTCTTGTTGATGGGATGGCCAGTATGTGGGAAACCATGTGCAAGCATCATGACAGCCAACTGAAAATAGCTACAGACCTCAAATCTCTTGATATTTCTCAAGCTCCTAAGGAAACAATCAAGCAGCATTATGACCGTACTGTCCAACTTTGGAATGTTGTCCAAGAATGGCATTCTCAATTTGAGAAGCTTGTGACTCACCAGAAACAATACATCCAAGCTCTTAACAGCTGGTTAAAGTTGAATCTCATTCCTATAGAAAGCAGcctaaaagagaaaatctcGTCGCCGCCAAAAGCTCAGAATCCACCAATCCAAGCCCTCCTCCATGCATGGCATGACTATTTTGACAAGCTCCCAGATGAGCTTGCAAAATCTGCCATTTCTTCATTTGCTGCCGTGATAAAGACCATCATACTTCATCAGGAGGAAGAGATGAAGCTAAAGGAGAAATGTGAGGAAAccagaaaagaatatataagaaaaaaccaGGCTTTTGAGGAATGGTACCAGAAGTATCTGATGCGTAGGGGGCCCGAAGAAATTGCTAACGAAAGAGGAGAGGAAGCAAATCCAAATAATGCTGTTTCAGAGAGGCAGTTTGCTGTTGAGAGTTTGAAGAAGAGATTAGAAGACGAAGTTGAAACCTACCAAAGACATTGTGTTCAGGTTAGAGAGAAGTCACTTGGGAGTCTCAAAACACGCCTGCCCGAGCTTTTTCGAGCTATGTCAGACTATACTCGCGCTTGTGCTGATGCTTATGAGAAATTGAAGTCAATCACACAGTCACGTGGTGCTGCGTG 2171 0.4417 MGCAQSRIDNEESVARCKERKNLMKEAVVARNAFAAGHSGYTMALKNTGAALSDYAHGESQVNHELHQEPLDTASQPPPPPPPPMEDNLPPPPPPLPNFSPSPLKRAATMPAITIQHRNPAREINSEAIAEEDGEDEDVKVDEGNRGKPMKKGAGVVGSEDVPHSPPRAPDMKSVPPMPEAKGMAWDYFFMMDNMAGPSLSAEDEIGAVNGENEAVDYGEVENVDGNGGNLANGINEIEPKTPEKVEQHLQEEEIAEPVNEKKQIKHSKTAPPEFRRAMKVAPSVTLMQILNALDDHFLKSSESAQEVNKMLEATRLHYHSNFADNRGHIDHSARVMRVITWNRSFRGLSNGDGAKDDFDSEEYETHATVLDKLLAWEKKLYEEVKQGELMKFEYKRKVALLNKQQKRGASAESLEKTKAAVSHLHTRYIVDMQSMDSTVSEVNHIRDAQLYPKLVALVDGMASMWETMCKHHDSQLKIATDLKSLDISQAPKETIKQHYDRTVQLWNVVQEWHSQFEKLVTHQKQYIQALNSWLKLNLIPIESSLKEKISSPPKAQNPPIQALLHAWHDYFDKLPDELAKSAISSFAAVIKTIILHQEEEMKLKEKCEETRKEYIRKNQAFEEWYQKYLMRRGPEEIANERGEEANPNNAVSERQFAVESLKKRLEDEVETYQRHCVQVREKSLGSLKTRLPELFRAMSDYTRACADAYEKLKSITQSRGAA 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00229 723 Coils Coil 594 614 - -
Bva10g00229 723 Coils Coil 663 683 - -
Bva10g00229 723 MobiDBLite consensus disorder prediction 58 177 - -
Bva10g00229 723 PANTHER UNCHARACTERIZED 1 721 - -
Bva10g00229 723 MobiDBLite consensus disorder prediction 73 101 - -
Bva10g00229 723 Pfam Protein of unknown function (DUF632) 287 592 IPR006867 -
Bva10g00229 723 PANTHER DNA LIGASE (DUF630 AND DUF632) 1 721 - -
Bva10g00229 723 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00229 Bva-Chr10 3477938 3481583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00229 1 77 Acyl Lipid Metabolism Gene Families AT2G27090 36.364 2.51e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00229 - - zju:107420703 1003.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00229 10 3477938 3481583 Bva10g00229 10 3477938 3481583 ECH