Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00227 ATGGCTTCTGGTTCGCCAAGGAACCGCATCGATCAGTTTTTTGCttcaaagaaaaggaaaaccgTTTCACCTGTTTCAAAAACTGGAAGGTCTGAAAAGGGTGCAAGACAGAGGGTTGATGGGTCTCCAAGTTCTAAAGCTACACTGGACGGGCACTTGGTAAATTCACAGGACAATTGCAACAACACAAGGCTGTTGCATGATGCCAGTGATTCTTTTGCTAGGCAGGATATAGTTAGAAGAAATTTGGCCCCAGAGATAAATCATTCTTTTGACAGTGAAGATGAGCAGCCTGTTTTATCAGCTCAAGGGCACCGACACTCTGAAGCAATTGGGAAGGGGCCTACAGATGTATTACCTAGGCTGGGTGATTTGGCAGTTGAAAACCATGCTCAAGAAAATAACTGCTCAGGTTTCAGACAGGGTGTTGAAGACTCACAACTCAAACAATTTGCTGCAGACTTTTTGTCTTTGTATTGCAGCACCAATTCACCATCAGAGTTCAAAGTGGATGCTCATAAGAGACACGCTACCTCAACATTACTAGAAGAAACGGGTAATTTACCCCAGAGGCGCAATGACACTTATAGTGAGACGGACTTTGGGGGCGAGGATATTTCTTCTAGTAATCAAAATCCTCAAGTGATCAAATCTAGTTTTGGTGGTAATGCTGTGCCATCTGTTTCTGTCTATTCTACAAAGGATTCCGCTCATGATGATACTATCGCCCTTGAGGCAAGCTTTAGAAGATGTAGTAATACACCTATATCATCTGTCAAGATGACGGAATGCCATACACCTGGATCCTTGATTGTTAAATCATGTGTTCAAAAGACTCCAAAGTCAACACGTGGAAGCTCAATGTTTTCACCTGGAGAGGCTTTTTGGAATGAAGCAATTCAAATTGCTGACGGTTTGTGTGTTCCCATGGCTAATTTTTCTGAGGCTCCTGAAGAGAGAAATATGATGGAGGATCAACTTCATACGAAGAACTCATGTAATTTACGAAATTATGATGGCAAGCCAAGTAAGACATTAGATCAAAGTGAAAGCAGGATCAGGAACATGGAAAAGGCCACTCCATTAGGGTTGGTTGGGACTCATACAAAAGATTCTGTCAGAGAGGTGTCCAGCATGCCCGTTaagcattttgatttttcattggAGGATAAAAATTTGGATGAAGGTACACCACAACGCAGCTGTTCGGATGATCTGATCAATGTTACTCATGAGGCTGGCATACAATTTGAACACGGTTCTGTCAACTCTACagatataaaaattaccaAGAACTCTACCATTGGTGGCACTACTCACACAAATGAAAAGATGAATGGACTCCAGCAGACAACTTCAGTGGATGAAGcattcaaaaaaattcatttatttagtcAGAATAGTGATGGCATGACATCTAATTCATCCCCCAACAAGGTTGGGAGAGTGATTGGTACTCAAAAATCTGACGAAGCTAGTACTCCTTCAAGCAATGCATTGCTTAATGACCATCTAGACCTGAACAATTGGCTTCCCCCTGAAATATGTAGTATATATGGAAAAAAGGGAATTTCGAAGCTTTATAATTGGCAGGTTGATTGTCTTCGGGTGGATGGCGTCCTGCAGAGAAGAAATCTTGTATATTGTGCGTCTACAAGTGCTGGTAAGAGTTTTGTTGCAGAGATTTTAATGCTTCGGAGGGTGATTTTAACTGGCAAAATGGCACTACTTGTTCTTCCGTATGTATCAATTTGTGCAGAAAAGGCAGAACACCTTGAGCTTCTTCTTGAACCACTTGGTAAACATGTTCGTAGTTATTATGGAAACCAAGGTGGTGGAACACTTCCTAAAGATACTTCTGTTGCTGTCTGCACAATAGAGAAGGCAAATTCATTGGTCAATAGATTATTGGAAGAGGGCCGTCTGTCAGAAATGGGAATCATTGTCATCGATGAACTGCATATGGTTGGTGATCCAAGTAGAGGTTATCTTCTAGAACTTCTATTGACAAAGCTTCGTTATGCAGCTGGGGAAGGAAATTCAGAATCTAGTGGAGAAAGTTCGGGaggcagcagcagcaacaaggCTGATCCTGCTCGAGGTCTACAAATTGTTGGGATGAGTGCAACAATGCCAAATGTTGCAGCAGTTGCTGATTGGCTTCAAGCAGCACTTTACCAGACAGAATTCCGACCAGTTCCCTTAGAAGAATATATCAAAGTTGGTAATTCCATTTATAACAGTAGAATGGAACTCTCCAGAACAATCTCAAAGGCTGCTGACCTTGGTGGTAGAGATCCAGATCATATTGTTGAATTGTGTAATGAAGTTGTTCAAGAGGGGCATTCAGTGTTAATATTTTGCTCAAGCCGAAAGGGTTGTGAATCAACTGCAAGGCATGTGGCaaagtttcttaaaaaatttgtcgTCAATGGTCGTGGAAATGATTCTGAGTTCGCTGATTTTACTTCAGCTATTGATTCCTTGAGAAAATGTTCTGCTGGATTGGACCCAATATTGGAGGAAACACTTCCTTCCGGTGTTGCATTTCACCATGCTGGCCTTACGGTTGAGGAAAGAGAGATTGTTGAAACTTGCTACCGCAAAGGACTCTTACGTGTCTTAACTGCTACATCAACCTTAGCTGCTGGGGTTAACCTTCCAGCTAGGAGGGTCATTTTCCGCCAACCTCGAATTGGTCTTGATTTTATTGATGGGACAAGATACAAACAGATGGCTGGTCGGGCAGGTCGAACTGGAATCGATACAAAAGGAGAGAGTGTACTTATCTGTAAACCGGAGGAGATAAAAAAAGTCTTGAGACTCCTTAATGAAAGTTGTCCTCCATTACATTCTTGTTTATCTGAAGATATTAATGGAATGACTCATGCAATTTTAGAAGTTGTGGCAGGAGGAATAGTTCAAACTGCTGATGATATTCATAGGTATGTTAGGTGTACTCTTTTGAACTCTACGAAACCATTTCAAGATGTGGTGAAATCAGCACAAGAATCCCTTCGATGGTTGtgtcaaagaaaatttctcgAATGGAATGAAGACAGTAAACTATACAGCACCACACCCCTCGGACGTGCAGCTTTTGGCAGTTCTCTCTGTCCAGAAGAATCACTTATCGTGCTGGCTGATCTTTCAAGGGCACGGGAAGGATTTGTCCTTGCATCTGATTTGCATTTAGTTTACTTGGTGACACCGATCAACGTAGATGTTGAGCCAGATTGGGAATTGTACTATGAGCGTTTCATGGAATTGTCTCACCTTGATCAGACAGTAGGCAATCGGGTAGGTGTTACAGAACCATTCTTGATGCGTATGGCACATGGCGCACCAATACGCCCTTCAAACAAGTCAAGAAATGATACAAATTGGTTGCACCGTAAACGAGGAAATCAACTTGGGAATATGAATGGAACTCTTAACTCAGATGATCAAACACTTCGTGTCTGTAGAAGATTCTATGTTGCTCTTATTTTGTCAAGATTAGTTCAGGAAATTCCTCTGGGTGAGGTTTGTGAAGCTTTTAAAGTTGCCAGAGGAATGGTGCAAGCCTTGCAGGAGAATGCTGGAAGGTTCGCATCTATGGTTTCTGTGTTTTGCGAGAGGCTTGGATGGCATGATCTGGAAGGCTTGGTTGCCAAGTTTCAGAATCGCGTTTCATTTGGAGTAAGAACAGAGATTGTAGAACTTACCACTATTCCCTATGTCAAGGGTTCTCGAGCCAGAGCTCTCTATAAAGCAGGTTTACGTACGCCTCTTGCAATTGCTGAAGCATCCATACCTGAAATAGTAAAAGCGCTTTTTGAATCGTCATCATGGGCCACAGAAGATTTGGCACGAAAGCGCTTACAAGTCGGTGTAGCTAAGAAGATAAAGAATGGTGCTCGGAAGATTGTTCTTGATAAAGCCGAAGAGGCTAGGGTTGCTGCTTTCTCAGCCTTAAAGTCACTTGGTTATAACATCCCACAGTTTGCTACACCCATCCTGTCAACTTCCGCTTATGATTCTACTAGGAAAGGAGTAGGAAGTATCTCCTCTGGAAGCGACACAGTTGAAAGTAATCATAGCTTTGTTGATGTGGAGCCCAGGGGAAATTCTGACAAAGTTGCTTCAGAAAAACTAAGAGAAGATATGGTAAAACCAGATACTGGTGTTCTGGCTTCttcagaagaaaaatcaagatGTGCAAAGCCATGTGGTGTGTCCACTGAAAAGTCAGTAGTTCCAGGAGATGGCTCTCTGACTATGAGGAATGAGCTCAGtgctaattttataaaagatgCTGACGTGACCACCCTCTCTGTCCTGTTACCGAAACTGAATGATAAAACCAGGATGCATGATGGGTACCTTTCTCTTGACAGAGAGGAACAAAGTCAGAGGGGAACCTTGTCTCTTGGTAATCCGTGTTATCCTTCTCAGGGAGGTCCTATCAATGCCATTAGTTGTCCTGGTGGACTTGATTCATTTTTGGATCTATGGGAAAGCCGGTCAGAATTCTACTTTGATATCCACTACAACAAACGATTAGAATTGAATGCTGCTGCCCCTTTTGAAATACATGGCATAGCTATCTGTTGGGAAAATTCTCCTGTGTACTATGTAAATCTTCCCAAGGATCTTCTGTTGTCAGACAACAGAAAAGATGAGTGTTTTTCTTTGGGTGCATCTGGTAATAAGCAAAAGTTTTCATCTTCTAAGCATGATTTGGAGAATGCTAAGTGTAGATGGAGAAGGATTGGTACAATAATGGGGAAAAAAGATGTCAGAAAGATCACCTGGAATTTGAAGATTCAGATTCAGGTGCTCAAAAGGCCAGCAGTTTCATTTCAGAGATTTGGTTGCCCAAATTATCTTGGAGATACTCTGGAGTTTGAAGTTGTAGACAATTCATACATATTGTTGTCTCCAATACATGCTAAAGATGCAATTGACATGTGCATTGTGGCTTGGATTCTTTGGCCGGATGAAGAGAGGAGCTCCAATCCAAACCTGGAAAAGgaagtaaaaaaaaggttatccTCTGAAGATTCTGCTGCAGCTAATCGGAGTGGCAGGTGGAAGAATCAGATGAGAAGAGCTGCACACAATGGTTGCTGCCGCCGGGCTGCACAAACTCGAGCATTGTGCTCTGTTTTGTGGAAATTGCTTGTCTCCGAGCAACTTGTTGAAGCGCTTATGAGTATAGAAATTCCACTGGTAAATGTACTTGCTGACTTGGAGCTTTGGGGAATTGGTGTTGACATTGAGAGATGTATCCAGGCTCGTAAATGGTTGGTGAAGAGGCTAAAGATTCTCGAGAAGGAAGCTTATAAGCTGGCTGGGATGACATTTTCATTGTATATGCCAGCAGATATTGCAAAGGTGCTGTATGAACACTTGAAGTTGCCCATACCTGATGGATGCACTAAGGGAAAGCAGCATCTAAGTACTGATAAACACAGTTTGGAAGCACTAAGGCATGAGCATCCCATTGTTCCAGTCATTAAAGAGCACCGAACATTAGCAAAGCTTTTGAATTGTACGCTGGGATCAATATGTTCACTGGCTAGGCTCTCCGTATGCACACAGAAGTACACATTACATGGCCACTGGCTCCAGACATCCACAGCGACTGGTCGGCTTTCAATGGAAGAACCTAATCTTCAGTGTGTAGAACATATAGTGGAGTTCAAAATGAAAGAGGATAAAAATGGAGGCGATGCTGACGATCACCATTGCAGAATTAATGCTCGTgatttcttcgttcccacgcAGGACAACTGGTTACTGTTGACGGCTGACTATTCTCAGATAGAATTGAGGTTGATGGCACACTTCTCAAAAGACTCTTCGCTTATTGATCTTCTTAGTAAGCCACACGGTGATGTCTTTACCATGATAGCAGCAAGATGGATTGGGTGTCCTGAGGATTCTGTTGGCTCCAAAGAAAGAGATCAGACCAAAAGGATGGTGTACGGCATTCTTTATGGTATGGGTGCCAAGAGCCTTGCAGAGCAACTGGATTGTACTTCAGATGAAGCTGTAGAAAAGATTAAGAACTTTAAAAGCTCTTTTCCTGGCGTTGCTTCCTGGCTTCAAGAAGCGGTTGCAACTTGTCGTAACAGAGGATATGCGGAGACACTCAAGGGAAGAAAACGATTtctgtcaaaaataaaatttggtagCGGTAAAGAAAAATCGAGAGCTCAGAGGCAAGCTGTGAATTCCATCTGTCAGGGATCCGCTGCTGACATAATTAAGATTgcaatgataaatatttactccATAATTGTTCCTGGAGTTGATGGCCCGGACTCGAGTTCTTCACTAGCCACCAAGTTTCACATGCTTAGAGATCGCTGCCGGATTCTGTTACAGGTACATGACGAATTAGTGCTTGAAGTCGATCCTTGTGTTATAAAAGAAGCTGCCCTGCTATTGCAGACAAGCATGGAGAATGCTGTCTCACTTCTTGTTCCTTTGCATGTTAAACTTAAGGTTGGGAGAACATGGGGATCTTTGGAGCCTCTCACGCCTGATCAATTCGTTGATGGTTCACACAGCACGGAATCCTA 6572 0.4121 MASGSPRNRIDQFFASKKRKTVSPVSKTGRSEKGARQRVDGSPSSKATLDGHLVNSQDNCNNTRLLHDASDSFARQDIVRRNLAPEINHSFDSEDEQPVLSAQGHRHSEAIGKGPTDVLPRLGDLAVENHAQENNCSGFRQGVEDSQLKQFAADFLSLYCSTNSPSEFKVDAHKRHATSTLLEETGNLPQRRNDTYSETDFGGEDISSSNQNPQVIKSSFGGNAVPSVSVYSTKDSAHDDTIALEASFRRCSNTPISSVKMTECHTPGSLIVKSCVQKTPKSTRGSSMFSPGEAFWNEAIQIADGLCVPMANFSEAPEERNMMEDQLHTKNSCNLRNYDGKPSKTLDQSESRIRNMEKATPLGLVGTHTKDSVREVSSMPVKHFDFSLEDKNLDEGTPQRSCSDDLINVTHEAGIQFEHGSVNSTDIKITKNSTIGGTTHTNEKMNGLQQTTSVDEAFKKIHLFSQNSDGMTSNSSPNKVGRVIGTQKSDEASTPSSNALLNDHLDLNNWLPPEICSIYGKKGISKLYNWQVDCLRVDGVLQRRNLVYCASTSAGKSFVAEILMLRRVILTGKMALLVLPYVSICAEKAEHLELLLEPLGKHVRSYYGNQGGGTLPKDTSVAVCTIEKANSLVNRLLEEGRLSEMGIIVIDELHMVGDPSRGYLLELLLTKLRYAAGEGNSESSGESSGGSSSNKADPARGLQIVGMSATMPNVAAVADWLQAALYQTEFRPVPLEEYIKVGNSIYNSRMELSRTISKAADLGGRDPDHIVELCNEVVQEGHSVLIFCSSRKGCESTARHVAKFLKKFVVNGRGNDSEFADFTSAIDSLRKCSAGLDPILEETLPSGVAFHHAGLTVEEREIVETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPRIGLDFIDGTRYKQMAGRAGRTGIDTKGESVLICKPEEIKKVLRLLNESCPPLHSCLSEDINGMTHAILEVVAGGIVQTADDIHRYVRCTLLNSTKPFQDVVKSAQESLRWLCQRKFLEWNEDSKLYSTTPLGRAAFGSSLCPEESLIVLADLSRAREGFVLASDLHLVYLVTPINVDVEPDWELYYERFMELSHLDQTVGNRVGVTEPFLMRMAHGAPIRPSNKSRNDTNWLHRKRGNQLGNMNGTLNSDDQTLRVCRRFYVALILSRLVQEIPLGEVCEAFKVARGMVQALQENAGRFASMVSVFCERLGWHDLEGLVAKFQNRVSFGVRTEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASIPEIVKALFESSSWATEDLARKRLQVGVAKKIKNGARKIVLDKAEEARVAAFSALKSLGYNIPQFATPILSTSAYDSTRKGVGSISSGSDTVESNHSFVDVEPRGNSDKVASEKLREDMVKPDTGVLASSEEKSRCAKPCGVSTEKSVVPGDGSLTMRNELSANFIKDADVTTLSVLLPKLNDKTRMHDGYLSLDREEQSQRGTLSLGNPCYPSQGGPINAISCPGGLDSFLDLWESRSEFYFDIHYNKRLELNAAAPFEIHGIAICWENSPVYYVNLPKDLLLSDNRKDECFSLGASGNKQKFSSSKHDLENAKCRWRRIGTIMGKKDVRKITWNLKIQIQVLKRPAVSFQRFGCPNYLGDTLEFEVVDNSYILLSPIHAKDAIDMCIVAWILWPDEERSSNPNLEKEVKKRLSSEDSAAANRSGRWKNQMRRAAHNGCCRRAAQTRALCSVLWKLLVSEQLVEALMSIEIPLVNVLADLELWGIGVDIERCIQARKWLVKRLKILEKEAYKLAGMTFSLYMPADIAKVLYEHLKLPIPDGCTKGKQHLSTDKHSLEALRHEHPIVPVIKEHRTLAKLLNCTLGSICSLARLSVCTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHIVEFKMKEDKNGGDADDHHCRINARDFFVPTQDNWLLLTADYSQIELRLMAHFSKDSSLIDLLSKPHGDVFTMIAARWIGCPEDSVGSKERDQTKRMVYGILYGMGAKSLAEQLDCTSDEAVEKIKNFKSSFPGVASWLQEAVATCRNRGYAETLKGRKRFLSKIKFGSGKEKSRAQRQAVNSICQGSAADIIKIAMINIYSIIVPGVDGPDSSSSLATKFHMLRDRCRILLQVHDELVLEVDPCVIKEAALLLQTSMENAVSLLVPLHVKLKVGRTWGSLEPLTPDQFVDGSHSTES 2190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00227 2190 Gene3D - 1875 2170 - -
Bva10g00227 2190 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 540 934 IPR027417 -
Bva10g00227 2190 CDD SF2_C_Ski2 731 932 - -
Bva10g00227 2190 Gene3D Taq DNA Polymerase; Chain T, domain 4 1749 1856 - -
Bva10g00227 2190 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 537 729 IPR014001 -
Bva10g00227 2190 PANTHER DNA POLYMERASE THETA 527 2178 - -
Bva10g00227 2190 Gene3D - 741 941 IPR027417 -
Bva10g00227 2190 Pfam Helicase conserved C-terminal domain 768 920 IPR001650 -
Bva10g00227 2190 Gene3D - 1937 2081 - -
Bva10g00227 2190 PANTHER DNA POLYMERASE I 527 2178 IPR002298 GO:0003887|GO:0006261
Bva10g00227 2190 Gene3D - 1107 1251 - -
Bva10g00227 2190 Pfam DEAD/DEAH box helicase 540 713 IPR011545 GO:0003676|GO:0005524
Bva10g00227 2190 SMART ultradead3 523 742 IPR014001 -
Bva10g00227 2190 Gene3D - 510 732 IPR027417 -
Bva10g00227 2190 MobiDBLite consensus disorder prediction 90 119 - -
Bva10g00227 2190 SMART helicmild6 838 920 IPR001650 -
Bva10g00227 2190 MobiDBLite consensus disorder prediction 1348 1372 - -
Bva10g00227 2190 SMART polaultra3 1913 2138 IPR001098 GO:0003677|GO:0003887|GO:0006260
Bva10g00227 2190 MobiDBLite consensus disorder prediction 41 55 - -
Bva10g00227 2190 PRINTS DNA-polymerase family A (pol I) signature 2020 2031 IPR002298 GO:0003887|GO:0006261
Bva10g00227 2190 PRINTS DNA-polymerase family A (pol I) signature 1983 2008 IPR002298 GO:0003887|GO:0006261
Bva10g00227 2190 PRINTS DNA-polymerase family A (pol I) signature 1866 1888 IPR002298 GO:0003887|GO:0006261
Bva10g00227 2190 PRINTS DNA-polymerase family A (pol I) signature 2121 2134 IPR002298 GO:0003887|GO:0006261
Bva10g00227 2190 PRINTS DNA-polymerase family A (pol I) signature 2042 2053 IPR002298 GO:0003887|GO:0006261
Bva10g00227 2190 MobiDBLite consensus disorder prediction 1 55 - -
Bva10g00227 2190 CDD DEXHc_POLQ-like 511 732 - -
Bva10g00227 2190 Pfam DNA polymerase family A 1756 2171 IPR001098 GO:0003677|GO:0003887|GO:0006260
Bva10g00227 2190 Gene3D - 1484 1746 IPR036397 GO:0003676
Bva10g00227 2190 SUPERFAMILY DNA/RNA polymerases 1727 2173 IPR043502 -
Bva10g00227 2190 CDD DNA_pol_A_theta 1749 2173 - -
Bva10g00227 2190 Pfam Helix-turn-helix domain 925 1016 IPR046931 -
Bva10g00227 2190 MobiDBLite consensus disorder prediction 1669 1691 - -
Bva10g00227 2190 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 769 969 IPR001650 -
Bva10g00227 2190 SUPERFAMILY Sec63 N-terminal domain-like 1148 1265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00227 Bva-Chr10 3457348 3471119 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00227 K02349 - gmx:100813857 3060.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00227 10 3457348 3471119 Bva10g00227 10 3457348 3471119 ECH