Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00224 ATGGCGCTGCTTCACTTGCCGAGAATtcgtttttccattttaaccTCGTTGCCTTCTCTTTCTGCTCATTCCAATCCCATAGCCAATCTGAAACTTCCCAGCAAAAATACCTTATTTTTCAGCTCCTCCTCTGTCTCTTTTGCACCCAAATCTATCCTCACAACCTCAGAACCCATACCCATAACTCATTTTCCAGATACCCCTTTGGAGACCCAGATAGAACTTCCACTAGAAAAGCTTTTTGTCCCACCGGAGACCGATGTTGATAATGCCACTTTGAGGACGAGAATTTTGAAGGGTTCGAACATAGTGCTCAGTAAGTACGCGAGGGATGCTCAGATAGTGCAAGCTGAGTTTATCAAAAGCAGTGTAAAAACCGAGGACTGTCCCTCTGATGGGCTTCCTGAGTTCGCTCTCGTTGGACGCTCCAACGTTGGCAAATCATCATTGCTCAATTCGCTTGTGCGGCGCAAGAGGTTGGCCTTAACGTCGAAGAAACCCGGCAAGACGCAATGCATTAACCATTTCCAGATCAATGATAGCTGGTATCTGGTTGATTTGCCTGGATATGGGTACGCAGCTGCGCCACATGAACTTAGAACAGATTGGGAGAAGTTCACTAAGGACTATTTCCTTAATCGGTCAACGTTGGTGTCAGTTTTTCTTCTCATAGATGCCAGCATTCCTGCCAAAAAAGTCGATCTCGAGTATGCCAGTTGGTTGGCTCAGAACCAGATACCAATGACATTAATCTTCACCAAATGCGACAAgcggaaaaagaaaaagaatggtgGAAAAAAACCAGAAGAAAACGTGAATGATTTTCAGGATTTGATACGTGGATTCTTTCAGACAGTTCCCCCTTGGATCATGACCAGTAGCGTCACCAATCAGGGTCGTGATGAGATACTTCTCCATATGGCCCAGCTACGCAACTACTGGCTCAAGCACTA 953 0.4376 MALLHLPRIRFSILTSLPSLSAHSNPIANLKLPSKNTLFFSSSSVSFAPKSILTTSEPIPITHFPDTPLETQIELPLEKLFVPPETDVDNATLRTRILKGSNIVLSKYARDAQIVQAEFIKSSVKTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFQINDSWYLVDLPGYGYAAAPHELRTDWEKFTKDYFLNRSTLVSVFLLIDASIPAKKVDLEYASWLAQNQIPMTLIFTKCDKRKKKKNGGKKPEENVNDFQDLIRGFFQTVPPWIMTSSVTNQGRDEILLHMAQLRNYWLKH 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00224 317 PANTHER MSS1/TRME-RELATED GTP-BINDING PROTEIN 75 314 - -
Bva10g00224 317 Pfam 50S ribosome-binding GTPase 137 254 IPR006073 GO:0005525
Bva10g00224 317 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 75 314 - -
Bva10g00224 317 Hamap Probable GTP-binding protein EngB [engB]. 122 311 IPR019987 GO:0005525
Bva10g00224 317 Gene3D - 108 313 IPR027417 -
Bva10g00224 317 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 313 IPR027417 -
Bva10g00224 317 CDD YihA_EngB 136 310 IPR030393 GO:0005525
Bva10g00224 317 ProSiteProfiles EngB-type guanine nucleotide-binding (G) domain profile. 133 313 IPR030393 GO:0005525
Bva10g00224 317 TIGRFAM GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 117 305 IPR019987 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00224 Bva-Chr10 3425489 3428494 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00224 K03978 - qsu:111987768 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00224 10 3425489 3428494 Bva10g00224 10 3425489 3428494 ECH